Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmur_2136 |
Symbol | |
ID | 9143137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachyspira murdochii DSM 12563 |
Kingdom | Bacteria |
Replicon accession | NC_014150 |
Strand | - |
Start bp | 2427548 |
End bp | 2429311 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_003634410 |
Protein GI | 296127158 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGACAG AAGAAGATTG CGATCTTTTG ATTAAAAACA ATGAAAAGAT TAGAAAATTA CTTGAAAAAG GTAATGCCAA CAAATATCTT ACCTTCAAAG AGATTAATGG TGCCATAGAC AATATGGATA CTGATGTAAT GGATATACTT TTTCAATTAT TAAATGCAAG AAAGATTGTA ATTGTTGAAG ACAAAAGGGA GTTTGAAAGC CTTTCCAAAA ATCAGAATAA AATTGATGAT ACTGCTAAGT TTATACATGT AGAAGATAAA GTCGGAAATA ATGATGATCC TATAAGACTT TATCTTAAAG AAATAGGAAA GGTAAGCCTT CTTACTCATG ATGATGAAGT AGATTACTCC AAAAAAATCG AATCCGGAGA ATCTGAAATT GAAAATATTA TACTTAATAC TCATCTTGTT GTAGGAGAAG TGCTTAATAC CATTAAAAAT GTTCAGACGG GAAAGGTTTC TATACATGAA ATATTAGAGC CGCCTAGAAT TTACAATGTT TCTACTCAGG AAAAAAGAAA ATTAGAAAGA AAATACAAAA ACTTTGAAAA AGAGTATACA GCATTAGCTG AAAAGTATCT TGCTTTGGAT AAGAGAATTA AAAAGATTAC TACTCAGAAA ACCATTAAAG CTCTTACCAA AGAACAGGAA GAGGTTAAAG AAAATATTGT TAAACTTCTA ACAAAAGTAA GATTAAACAG AATGGAAATA GACAGAATAG CCGAAAAGCT AAAGTTCTAT CTTCATAGAA TAAATCAAAT AGAAGAATAT TTTGAAAAAC TTAAAAAAAG ATACTATAAA GAAATATCTG ACTTTGAAAA CTACTATAAA GAAATAGAAT CTGGAAATAA GGATATATAT ATAAGGCTTG TAGATGAGTT TAATATTACT CCGGAAGCTA TAGAAGCTGT TATAACAAGT TTTCATAAAG CTCAAGTACG TATGGCCGAT ATTTATGATG AAGTACGTAT TGATAAAGAA ACTTTGGTGG AATGGGTACG TAAAATAGAT TCTGCTAGAA GAAAGATAGC TCAGGCTAAA GATCATATAG TTAAAGCTAA TTTAAGACTT GTTATCGCTA TAGCCAAAAA ATATGTTAAT AGAGGTCTTC ATTTCTTTGA TTTGGTTCAG GAAGGAAATA TTGGTCTTAT AAAGGCTGTA GATAAATTTG AATATAAAAA AGGATATAAA TTTTCTACAT ATGCCACTTG GTGGATACGT CAGGCTATTA CACGTTCTAT AAGCGATCAG GCTAGAACTA TAAGAGTACC TGTTCATATG ATAGAGCAGA TTAATAAAGT TCAAAGAGTA TTAAGACAGT ATATGCAGCA GCATGGAAGA GAGCCTTCTA TTCAGGAGAT AGCAAAGGCA TTAGGCTGGC CTGAAAGCAG AGTAAAAAGC GTAAGAAATG TAGCTAAAGA CCCTGTATCT TTAAATGCTC CTATAGGCGA TGAAGAGGAC ACTATATTAG GAGAACTTAT AGAAGACAAA GAATTTGAAA GTCCTCAAAA TATCACTACT TTCAAAATCT TAAGAAAGCA AATTGACTCC ATACTAGATA GTCTTCCAGA TAGAGAGCAA AAAGTTATAA GAATGCGTTT CGGACTTGTT GACGGATATT CTCATACTCT TGAAGAGGTG GGATATGTAT TTAAGGTTAC AAGAGAGCGT ATTCGTCAGA TAGAGGCTAA AGCTATAAGG CGTTTAAGAG CTCAGTCAAA GAAAAAAGAG TTAAAAGATT TTCTTGATTC TTAA
|
Protein sequence | MMTEEDCDLL IKNNEKIRKL LEKGNANKYL TFKEINGAID NMDTDVMDIL FQLLNARKIV IVEDKREFES LSKNQNKIDD TAKFIHVEDK VGNNDDPIRL YLKEIGKVSL LTHDDEVDYS KKIESGESEI ENIILNTHLV VGEVLNTIKN VQTGKVSIHE ILEPPRIYNV STQEKRKLER KYKNFEKEYT ALAEKYLALD KRIKKITTQK TIKALTKEQE EVKENIVKLL TKVRLNRMEI DRIAEKLKFY LHRINQIEEY FEKLKKRYYK EISDFENYYK EIESGNKDIY IRLVDEFNIT PEAIEAVITS FHKAQVRMAD IYDEVRIDKE TLVEWVRKID SARRKIAQAK DHIVKANLRL VIAIAKKYVN RGLHFFDLVQ EGNIGLIKAV DKFEYKKGYK FSTYATWWIR QAITRSISDQ ARTIRVPVHM IEQINKVQRV LRQYMQQHGR EPSIQEIAKA LGWPESRVKS VRNVAKDPVS LNAPIGDEED TILGELIEDK EFESPQNITT FKILRKQIDS ILDSLPDREQ KVIRMRFGLV DGYSHTLEEV GYVFKVTRER IRQIEAKAIR RLRAQSKKKE LKDFLDS
|
| |