| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_1588 |
|---|
| Symbol | |
|---|
| ID | 9142581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 1824608 |
|---|
| End bp | 1826209 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003633874 |
|---|
| Protein GI | 296126622 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 79 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TATTAGTAAT TTTATCTGTT ATACTTTTGT TTGTTTTTTC ATGCTCAAAA
ACAGATAATA ATGAAGAATC ATCAATATCA ATAAATTTGG GACCGGAACC AAAAACAATA
GACCCAACAT TAAATTCTTT AAATATGGCA TCATGTTATA TACATCATGC ATTTGAAGGA
CTTACAAAAA TAGATTCCAA TAATAATGTA AAGCCGGGTA TGGCAGAAAG TTGGAATATA
TCTGATGATG GATTAACTTA TACTTTTAAT ATAAGAAGAA ATGCTAAATG GTCTGACGGC
AAACCAGTAA CTGCTAAAGA TTTTGAATAT TCTTGGAAGA GGGCAGTTGA TCCTAATACT
GCAGCTGAGT ATTCATATAT GATGGAAGTA GTGAAAAATG CCAAAGAAAT AAATTCAGGC
ACTATGGATT ATAATAATTT GGCAGTAAAA GCAGTTAATG ATTATACATT TCAGGTAGAA
TTAGCAAATC CTGCTGCTTA TTTTTTAGAG TTTATAGCAT CTACTGGTGT ATTTTTCCCT
GTCAGAAAAG ATATTGTAGA AAAGTACGGC GATGAATGGA CTTTAAAACC AGAAACATAT
ATTGGAAATG GATCTTACAA AATGAAGGAA AGAGTACCAG ATGAAAAAAT AGTTTTTGAA
ATAAATACTA ACTATTATGA TAAAAAAGAA CAAACATCAA AAGAAATAAA CTTCGTTCTT
ATGAGCGATC CTAATACTGC AATTGCTGGC ATAAGAGGCG GAACTATAGA TTTTTCTGCA
TTAGAGCCTC CTTCTGCTGA GATAGAAACT TTAAAAAATG ACGGATATAT AGTAGGTAAT
AATGCTATAG GTACTTATTA TATAGAGTTA AATATTACAA ATAAAGCATT TGAAGATAAG
AGAGTAAGAC AGGCTTTGTC GCTTGCTATA GATAGAAATT ATATAGTATC AAATGTTACT
AAAGGCGGAC AAGTTCCAGC TGGTGCTTTT GTACCTACTG AGGTAAGAGG ATTAGAAACT
ACATTTAGAA AAGAAAATAA AGAATATATA GATGTTAATA ACTATGAGGC TAATGTTCAA
AAGGCAAAAG CATTAATGGC GGAAGCTGGA TATCCAGACG GACAAAATTA TCCGGTAATA
GAATTAAAAG TTTCACCAGG TATTTATGTG CTTGTAGGAG AGGCTATTCA GCAGATGTGG
AAAGAAAATT TAAATGTTAA TGTTTCTTTA GTTCAGGAAG AGTTTCCTAT TACTCTTCAA
TCTTTACTAG AAAAAGATTA TCAAATGGCT AGAATGGGCT GGACTGGGGA TTATAATGAT
CCTATGACTA TGCTTGATGT TATGCTAAGC TACAGCGGAG TAAATCATAC TGGTTTTAAC
AATGAAAATT ATGACAGTCT TATATTAACA GCAAAAGAGT CTGCTGATAA TACTGTGAGA
ATGAAGTCTA TGGCAGAAGC TGAAAATATA TTAATGGAAG AGATGCCTAT AATTCCTCTC
TATTACAGAG CTGATTCTTT TATAAAAAAT CCTAAATTAA AAGGTGTGGT ATTAAACCCT
TTAGGAAGAC ATAAATTTAA TTACGCTTAT ATAGAAGAAT AA
|
|---|
| Protein sequence | MKKILVILSV ILLFVFSCSK TDNNEESSIS INLGPEPKTI DPTLNSLNMA SCYIHHAFEG
LTKIDSNNNV KPGMAESWNI SDDGLTYTFN IRRNAKWSDG KPVTAKDFEY SWKRAVDPNT
AAEYSYMMEV VKNAKEINSG TMDYNNLAVK AVNDYTFQVE LANPAAYFLE FIASTGVFFP
VRKDIVEKYG DEWTLKPETY IGNGSYKMKE RVPDEKIVFE INTNYYDKKE QTSKEINFVL
MSDPNTAIAG IRGGTIDFSA LEPPSAEIET LKNDGYIVGN NAIGTYYIEL NITNKAFEDK
RVRQALSLAI DRNYIVSNVT KGGQVPAGAF VPTEVRGLET TFRKENKEYI DVNNYEANVQ
KAKALMAEAG YPDGQNYPVI ELKVSPGIYV LVGEAIQQMW KENLNVNVSL VQEEFPITLQ
SLLEKDYQMA RMGWTGDYND PMTMLDVMLS YSGVNHTGFN NENYDSLILT AKESADNTVR
MKSMAEAENI LMEEMPIIPL YYRADSFIKN PKLKGVVLNP LGRHKFNYAY IEE
|
|---|
| |