Gene Bmur_0893 details

Gene Information

• Locus tag: Bmur_0893
• ID: 9141874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachyspira murdochii DSM 12563
• Kingdom: Bacteria
• Replicon accession: NC_014150
• Strand: +
• Start bp: 1054269
• End bp: 1056191
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 26%
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_003633191
• Protein GI: 296125939

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.000115174
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAGAC TTATTAGTAT TGTATTGCTG ATTTTTAGTA TGGCAGCTGG TATATCATTT 
GCCCAAACTA ATGAAAAAAA TGTGTATGAA GGTTCACAGT ATATAAGAAA TGAAGAAGAA 
GCAAAAGCAG CTTATACTTT AGCTTTGTAT TATAAAGAAA GAGCATTAGC TTCTAAAACG 
GCAACAGCAG AAACTATTAA AGACTTGGAA AGTGCAAAAG TGATACTTTT AGAAGTTCTT 
AAATATGTTC AAAATAAAGA TATATATATA ACATTAGCAG AAACTCATGA AGCTTTGGGA 
GAATATTATC AAAGTTCAAA AATTTATGAT AATTTAGTTC TAAATAACCC TGAAGATACA 
GAACTGTTAG TTAAAGCAGC CGAAAGAAAT ATTTTTATAA TAAACAATAT AGACAAAGCA 
AGATACTATC TGCAGACTGC TTATGAAATA GATAATACAA ATAATGATGC ATTGATATTA 
TTAGGTTTTA CATACTATCA GAAAAGAGAA TTTGAACAGG CTGTATATTA TTTTAATAAA 
GTAAATGAAA ATAACAAAGC AAGCAATAAT TATATACAGT ATTATAATTT TTATTATGGT 
ATGAGCGAGT TTTATTTAAG CAAATTTAAT AATGCTCTAT TAAGATTAAA TAAACTTCAA 
AATGTTCAGT TAGCTCCTAG TGATGAGTAT AGTGCTTCTT ATGCAGTAGT AAAAAGCTAT 
CAGGCTTTAG AAAAATATAA TGAAGCCTAT TCCAACAGTA TTATAATTGA TGATGCTTTA 
TTTTTAAGTG CATATTTAAG TTTTATGGCT GATAAATATA ATAATGAATT ATTTGATGAA 
ATAGATCCTT CATACCCTAA TACTCCTAAA ATATTATCAA TAATTATGGA AGCAGAAACT 
AACGGATACA GCAATGCATT AAATATGATA GAAACTGATT TAGACAGAAG AGAAATAGAT 
TTGGATATTA TACAAACATA TTATAAAATG ATAACTGAAA CAGGAAGCAA AGATGATAAA 
ATAAAATCAG AAATGGATAT AATATCATTC TATCTTATGA TAAAAAATAT AGATGCTTTA 
CCTAAACATA TAGACAATTT AATAAATTAT GATAAAAGCG GAAAGTTTAA TAATCTATAT 
CTTCAGGCTG CATTAGAGTT TAAAAACCAA AATAATTATA AATCATCTAA AGAAATGATA 
GAAAAATATT TATCTTTGGA TAATAAAAAT ATAAAAGAAA ATGAATTAGT ATCATTGGTA 
TTAACAGCAA GCGATATAGG AGAGGCTAAT TTAGCAATAA GTGCCGCTGA AAAATATGAA 
AAAACACAAT ATTCATTCAG CTACTTAAAA GCATATGCAT CATTTGTTAA TAAAGATAGT 
GAGAATACTA TTAAATATTT AAATGAAGAC TTTGAATATT TTTCTAATAA TAAATCAAAC 
ACAAATGATT ACAGAATAAA TATTCCATAT GTAACAGCAT TAGCAGCAAA TAATAAAGAC 
TCAGCATTGC TTTATGCTAA TTATAAATAT TCATTAGACA CAAACTCAGC AGAAAATATA 
AACAGCCTAT CTTGGGCATT AACTGATTTA GGAGAGGATT TGGACAGAGC AATAAGTCTC 
TCAAAAAATG CTGTATCATT AGAACCAAAA TCTCCTCACT ATATAGATAC TTTAGGAGTG 
GCATACTATA AGAAAGGCGA TTATGATAAT GCTTTAAGAA CTTTATTAAA GGCATTATTA 
TATATAGATG AAGGCTCTAA AGCTGAGATA TACGCTCATA TAGCAGACGC CTATTACGCT 
AAAAATGATT ATAAAAATGC TCTTAAATAT TACAGAAAAT CAATATCATC TTATGAAAAA 
GAATTTGATT ATGATGAAAA TAGAATAAAA GAGAAAATAA AAAGTTTAAC TGAGAATAAT 
TAA 

 

Protein sequence

MFRLISIVLL IFSMAAGISF AQTNEKNVYE GSQYIRNEEE AKAAYTLALY YKERALASKT 
ATAETIKDLE SAKVILLEVL KYVQNKDIYI TLAETHEALG EYYQSSKIYD NLVLNNPEDT 
ELLVKAAERN IFIINNIDKA RYYLQTAYEI DNTNNDALIL LGFTYYQKRE FEQAVYYFNK 
VNENNKASNN YIQYYNFYYG MSEFYLSKFN NALLRLNKLQ NVQLAPSDEY SASYAVVKSY 
QALEKYNEAY SNSIIIDDAL FLSAYLSFMA DKYNNELFDE IDPSYPNTPK ILSIIMEAET 
NGYSNALNMI ETDLDRREID LDIIQTYYKM ITETGSKDDK IKSEMDIISF YLMIKNIDAL 
PKHIDNLINY DKSGKFNNLY LQAALEFKNQ NNYKSSKEMI EKYLSLDNKN IKENELVSLV 
LTASDIGEAN LAISAAEKYE KTQYSFSYLK AYASFVNKDS ENTIKYLNED FEYFSNNKSN 
TNDYRINIPY VTALAANNKD SALLYANYKY SLDTNSAENI NSLSWALTDL GEDLDRAISL 
SKNAVSLEPK SPHYIDTLGV AYYKKGDYDN ALRTLLKALL YIDEGSKAEI YAHIADAYYA 
KNDYKNALKY YRKSISSYEK EFDYDENRIK EKIKSLTENN