| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4242 |
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| Symbol | |
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| ID | 9140964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 5418576 |
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| End bp | 5420405 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_003632248 |
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| Protein GI | 296124470 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATATG CGAGTTTACA GGCCTGTGTG CGTGATCTCG AACAACACAA TATGCTGCGG
CGTATTGATG CCGAGATCGA TCCCTGCCTG GAAATGGCCG AGATCCAGCG GCGGGTTTAT
CTGGCCAAGG GCCCGGCTCT TCTCTTTACC AGACCTAAGG GGTGCCGCTT TCCGATGGTT
TCCAACCTGT TTGGAACGAT TGAACGCACA CGATTTCTTT TTCGTCACGA ACTCGAAGCG
GTTCGTCATC TGGTCGAACT CAAGATCGAT CCGCAGCAAC TGGCGAAAAA GCCGTGGCGA
TACTGGGATG TGCCACTCAC TCTCTGGAAA ATGTGGGTGC GGCGGGTGCG TTCGGGCCCT
GTTACCGCCT GCGAAACGAC GATCAGTCAG TTGCCACAAC TGAAGAGCTG GCCCAACGAC
GGTGGCGGCT TTATCACTTT GCCACAGGTT TACAGCGAAG ATCCCTTCGC ACCAGGCTTT
GGCAAGTCGA ATCTCGGGAT GTACCGAGTT CAGTTAACGG GAAACGATTA TCTGCCCGAT
CGTGAAATCG GTCTGCATTA TCAGATCCAC CGCAGTATTG GTGTCCATCA TGCCCATGCG
GCCCAGCGTG GTGAACGACT CAAGGTCAAC ATTTTTGTCG GCGGCCCACC GGCGATGACC
TTAGCCGCCG TCATGCCCTT GCCTGAGGGA CTTTCGGAAC TTCTTTTTGG GGCCGCACTG
GGTGGCAGGC CGATTCGCAT GGTTTCGCGC CGGGGAGAAC TTCCGTTCTG GGCCGATGCC
GATTTTGTCA TCACCGGATC GATTGATCCC CATGAAACCA AGATCGAAGG CCCGTTTGGC
GATCACCTAG GGTACTACAG CTTGCCGCAT CCCTTCCCGG TGATGCAGGT CGATAAGGTG
TACCACCGCA AAGACGCCAT CTGGCCATTA ACGGTCGTTG GTCGGCCACC TCAGGAAGAC
ACCTCCTTCG GCGAGATCAT TCATGAGATT ACCGGCCCGA TCATTCCCAC AGTCATCCCC
GGTGTGAAGG CCGTGCATGC CGTCGATGCG GCTGGTGTGC ATCCTCTGCT TCTGGCAATT
GGCAGTGAGC GCTATACGCC TTATGCGAAG CGAAATCGTC CCCAGGAACT CCTCACACAG
GCCAATGCAA TCCTTGGACA GGGACAACTC TCACTGGCCA AGTATCTGCT GATTGTGGCT
CATGAAGATG AACCATCGCT CGACATCCAC GACATCGAGG CCTATTTCGC TCATCTCTTG
CGCCGGATTG ACTGGTCGCG TGATCTGCAC TTTCAAACCA AAACAACCAT CGACACACTC
GATTACTCAG GGAGTGGTTT CAACGAAGGC TCAAAAGTGG TGATGGCAGC CACCGGGCCC
GTTCGTCGGG AGCTACCTAC TAACATCACG GAAGAGTTTC ATTTGCCAGA TGGATTTCGA
AATCCCAAAC TCTGCATGCC GGGTGTGCTG GCGATTGAAG CTCCGGCCTT TCAGCCAGAA
AACGCGGATC TGCGCAGGTT CTGCGATGCG TTTCCAGTCA ATTCGCCGAT CAACAGCTTC
CCGTTGATAA TGCTGGTCGA TGATGCCGAT TTCTCGGCTC GCACACTCAA CAACTGGTTA
TGGGTGACAT TCACCCGATC GAACCCTGCC ATTGATATCG ATGGCATTGG TGCGTTTACA
GAAGCCAAGC ATTTTGGCTG CACAGGGAGC CTTGTGATCG ATGCACGAAT CAAGCCTCAG
CATGCTCCAC CTTTGATCGA AGATCCTCAA GTTTCTGCCC GAATCGATCA ATTGGCAATT
CGAGGTGGGC CATTGGCAGG ATTATGGTAG
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| Protein sequence | MGYASLQACV RDLEQHNMLR RIDAEIDPCL EMAEIQRRVY LAKGPALLFT RPKGCRFPMV
SNLFGTIERT RFLFRHELEA VRHLVELKID PQQLAKKPWR YWDVPLTLWK MWVRRVRSGP
VTACETTISQ LPQLKSWPND GGGFITLPQV YSEDPFAPGF GKSNLGMYRV QLTGNDYLPD
REIGLHYQIH RSIGVHHAHA AQRGERLKVN IFVGGPPAMT LAAVMPLPEG LSELLFGAAL
GGRPIRMVSR RGELPFWADA DFVITGSIDP HETKIEGPFG DHLGYYSLPH PFPVMQVDKV
YHRKDAIWPL TVVGRPPQED TSFGEIIHEI TGPIIPTVIP GVKAVHAVDA AGVHPLLLAI
GSERYTPYAK RNRPQELLTQ ANAILGQGQL SLAKYLLIVA HEDEPSLDIH DIEAYFAHLL
RRIDWSRDLH FQTKTTIDTL DYSGSGFNEG SKVVMAATGP VRRELPTNIT EEFHLPDGFR
NPKLCMPGVL AIEAPAFQPE NADLRRFCDA FPVNSPINSF PLIMLVDDAD FSARTLNNWL
WVTFTRSNPA IDIDGIGAFT EAKHFGCTGS LVIDARIKPQ HAPPLIEDPQ VSARIDQLAI
RGGPLAGLW
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