| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4238 |
|---|
| Symbol | |
|---|
| ID | 9140960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 5413348 |
|---|
| End bp | 5414400 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1559 |
|---|
| Protein accession | YP_003632244 |
|---|
| Protein GI | 296124466 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000246422 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCC AGAAACGACA TGGTTTCACT TTGATTGAAC TGCTGGTAGT GATCGCCATT
ATTGCAATAT TAATTGCATT GCTTTTACCA GCCGTGCAGC AGGCCAGAGA GGCCGCCAGG
CGAACTCAAT GCCGAAATAA TCTCAAGCAA CTGGGTCTGG CTCTCCATAA TTACGAGAGC
ACTTTCACGG TCTTTCCCAC AGGTGGAAAC AGTTCGAGTT ACTCGGTCCA GGCTCGAATT
CTCCCCTATA TCGATCAGGG CAATGTGCAG AATCTGATCA ACTTCAGCGT GCCTCCACAG
ATTGGCTCCG GCCCCAGTTC GACAGTCAAT CCGGCACTTG CGACAGTTTT CCCGAACGTG
GTGCCCGTTT TCCTTTGCCC CAGCGATCCT GCTCCCACGC AATATCGATT CGCTTCCGGA
GCCAACACTT ATACCTACGG CGGCAACAAC TACATGGTCA GCACCGGCAG CGGGACCGGC
ACCTTCTACG ACGACCGCTT TCCCACAGAT GGAATCTTCT GGTTTAACTC GAGTGTCCGC
TTCCGGGACA TCACTGACGG GACTTCCAAT ACCGTTTTCA TGAGTGAAAC CATTCGCGCC
GATGGAAGCC CTGACAGCAC GAGTGAACCA TTTCCTTACC GCAAGCTGCT GGCTGGAACT
TCCGGTGCCT CGAGCAGTGG AGCTCCCGCC ACGGGCGGCT ACATGGGTTC TGGAAGTGGC
TGGCAAACAG GCCTCATCAG CAATCCCGAT CTCGCTCCCG TCATTCCCGG AAAGACCTGG
AAAGGTGGAA CGGATGGCTC AGGACGCGGC CTCTCCTGGG TTCGTTCACT CAGCACTTAC
GTCACCACCA ACGGTTATAA CCGACCCAAC AGCAACATCC CCGATGTTCA AGTTCACGGC
GTCGGCTTCT ATGGCCCTCG CAGTCTCCAC ACAGGTGGCG CTCACGTATT GATCGGCGAC
GGAACCGTTC GCTTCCTCTC TGAGAACATC GATATCACAC TCCACCGCGC ACTTCACAGT
CGCAACGGCA ACGAAGTCGT CTCCGAATTC TAA
|
|---|
| Protein sequence | MNIQKRHGFT LIELLVVIAI IAILIALLLP AVQQAREAAR RTQCRNNLKQ LGLALHNYES
TFTVFPTGGN SSSYSVQARI LPYIDQGNVQ NLINFSVPPQ IGSGPSSTVN PALATVFPNV
VPVFLCPSDP APTQYRFASG ANTYTYGGNN YMVSTGSGTG TFYDDRFPTD GIFWFNSSVR
FRDITDGTSN TVFMSETIRA DGSPDSTSEP FPYRKLLAGT SGASSSGAPA TGGYMGSGSG
WQTGLISNPD LAPVIPGKTW KGGTDGSGRG LSWVRSLSTY VTTNGYNRPN SNIPDVQVHG
VGFYGPRSLH TGGAHVLIGD GTVRFLSENI DITLHRALHS RNGNEVVSEF
|
|---|
| |