Gene Plim_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4221 
Symbol 
ID9140942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5394332 
End bp5395372 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content58% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003632228 
Protein GI296124450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGCT TGACTCTTCC CACTGCACGT CCTGGGCGAG TTGCTCGTCG TCCGGGATTC 
ACACTGATCG AGCTGCTGGT GGTCATTGCG ATCATCGCTA TTTTGATTGC CCTGCTGCTC
CCGGCTGTGC AGCAGGCGCG CGAGGCGGCC CGGCGGACTC AGTGCCGCAA TAACCTCAAG
CAATTGGGGA TTGCGATGCA CAATTACCAC GACACGTTCC GCGTCTTTCC GCCAGCGGGT
GTCGATGGGA TGAAAGGGAC ATCGGGCCGT CGGTATTCCT TCGCGATCAG CATTCTGCCG
TATGTCGATC AGACACCACT GTATAACACG ATCATGGCCA ATACCGGGGC GGGAATGGCT
GATCCCTGGA ATCGACCCGC TTACTTTACC GTCGATGTTC CCGGCTTCAT CTGCCCCTCC
GATGTACCAC CCGGCAATCG AAATGAAAGC CCCAGCCTGC TCAACTATCG CGTGAGTGTG
GGAGATACTC TCAACGACAA CAACGGCACC AATACTCGCG GCATGTTCGC CTACCGCAGC
AATACAGGCA TGCGTGATGT GACAGACGGT ACCAGCAATA CCATCATGAT GGCCGAAGCT
GTCATGGGTG GTGTCGATAC CACCGCGATC CTGGGTGGTG TGGCTGTGGG TGTGACAACC
AGCACTCCTC AGGCCTGTCT CAGCCTGATT GATCCTGCCA CCCGTACTTT GACTGGTGCT
GTGCGGACAG ATTTCCGACC ACCGGGGGGA CGTGCCTGGG ATGGACGGCC ATACTTCGCC
TTTGTGGCCA CTGCTGTTCG GCCCAACGGT CCTTCCTGCC AAAGCTCAAC GGTCGATGGT
GGCTGGGGCC ACGCCACGGC TTCCAGTCGG CATACAGGGG GCATTCATGC GTTGATGGGT
GATGGCGCTG TGCGATTCAT CAGCGAAAAC ATCAGTGCCG GTGATCCCAA TGCGACCTCG
CCTGGCAGCG GCCCATCTCC TTATGGTGTG TGGGGTGCAA TAGGAACTCG TGCCTCGGGA
GAGACGGTCA ACGAGTTCTA A
 
Protein sequence
MYRLTLPTAR PGRVARRPGF TLIELLVVIA IIAILIALLL PAVQQAREAA RRTQCRNNLK 
QLGIAMHNYH DTFRVFPPAG VDGMKGTSGR RYSFAISILP YVDQTPLYNT IMANTGAGMA
DPWNRPAYFT VDVPGFICPS DVPPGNRNES PSLLNYRVSV GDTLNDNNGT NTRGMFAYRS
NTGMRDVTDG TSNTIMMAEA VMGGVDTTAI LGGVAVGVTT STPQACLSLI DPATRTLTGA
VRTDFRPPGG RAWDGRPYFA FVATAVRPNG PSCQSSTVDG GWGHATASSR HTGGIHALMG
DGAVRFISEN ISAGDPNATS PGSGPSPYGV WGAIGTRASG ETVNEF