| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4213 |
|---|
| Symbol | |
|---|
| ID | 9140934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 5385967 |
|---|
| End bp | 5387079 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003632220 |
|---|
| Protein GI | 296124442 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.1387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGAAA CGACCGTTGA TCTGCTGATT GTTGGTCAAG GTGTCGCAGG ATCGGCTCTC
GCCTGGCAGG CACTGCGTCG CCATCTGAAA ATTCATGTCA TCAGTTCACC GACTGAATGG
CCACCTTCGG CCTCTCAAGT GGGAGCAGGA CTGATCACAC CGATCACCGG CTCCAGGTTA
GCACTGGCCT GGCGTTTTGC AGAATTTCGA TCGTCGGCTT TGGATCTTTA TCGTTTTGTG
GCCCACGAGA CCAAACGAGA CTGCTGGCGA AATCGACCCG CCCTGCGCTG GTTGACGATC
GCCGACGAAG AACTGTGGTT ATCGCGCTGC CAGAAGTTTC CCGCATCAGC CAACTATCTC
CAACCCGTCG AACCGGATCT CGTCACTTCG CGAGAACATG GCATCCATGG GCCAGCTGGT
TCAAAACCTT ATGTCATGCC AGAGGCGGCC CGGGTGCTCA TGCCTGTCTT TCTGGAGGCA
ACAAAGAGGT GGCTGACGGA AACATCCTGT CTTTCACGAG CGGAATTCAA GCCTCTCGAT
CTGATCTGGG ATGACGTGGC GCGTCATTGG AAATGGAGAT CGATGACCGC CCGGCACATC
GTCTTTTGCA CTGGCTACAC TCCACAATTG ATCCGGCTGC CATTTCTCGC TGCCAAAGGG
GAGTTAATGG AAATCGACCT TCCGGGGGCT CGCCAGGATT ATTCCTGGCA TGGAGGGATC
TGGATGACAC CACAAGAGCA GGATCGCTGG CTGGTCGGCG CAACCTACGA CCCATTGCAT
CTGGATCAGG AAATCACATC TGAGGCTCGT CTGGAGTTAA GCCTGGGTCT CGCACAGTGG
GGAATCAGAA ATCCAAAAAT CTGCTCTCAG CACGCCGCCA TCAGGCCCGC TCTCCCTGGT
CAGATGCCAG CGATTGGCTG GAGCCTGCCA GAATCCATTC TCGGGAGAAT CTCAGAGGTA
ACCTGGCCAC GGGAAAAGAA CTGCGGGGTG ATCAACGGAC TGGGTTCACG TGGTGCTCTA
TGGGCTCCAC TGCTGGCCGA CTGGTTACTC GACGCGATGG CAGGCCAACC CCTTCCTCCA
GAAATCAATC TGACCCGGTT TCTGAGGTCT TGA
|
|---|
| Protein sequence | MSETTVDLLI VGQGVAGSAL AWQALRRHLK IHVISSPTEW PPSASQVGAG LITPITGSRL
ALAWRFAEFR SSALDLYRFV AHETKRDCWR NRPALRWLTI ADEELWLSRC QKFPASANYL
QPVEPDLVTS REHGIHGPAG SKPYVMPEAA RVLMPVFLEA TKRWLTETSC LSRAEFKPLD
LIWDDVARHW KWRSMTARHI VFCTGYTPQL IRLPFLAAKG ELMEIDLPGA RQDYSWHGGI
WMTPQEQDRW LVGATYDPLH LDQEITSEAR LELSLGLAQW GIRNPKICSQ HAAIRPALPG
QMPAIGWSLP ESILGRISEV TWPREKNCGV INGLGSRGAL WAPLLADWLL DAMAGQPLPP
EINLTRFLRS
|
|---|
| |