Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_4189 |
Symbol | |
ID | 9140910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 5353651 |
End bp | 5355324 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | type II secretion system protein E |
Protein accession | YP_003632196 |
Protein GI | 296124418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCG GGGCGACACT GGTCCGTAAA GGAGTCATTA CTCCTGATCA GCTCAAAGAA CTGGGTGTCC CCAGCGGTGC GCGCGTTGAT CGACTGGTGA TCGACAAAGG CTGGGCCGAC GAAGGTCAAG TTCTGCAGAC CATTGCCCAG GAACTGGGGA TGCGCTTCGT CGATATCAAG CACGAAGCAA TTGATCGCGA TCTGCTGATG CAGTTCCCCA CGAACGCTGT CTTCCGGCAC TCTCTGCTGC CCATTGGTCG AAACAACGGC AGTGTCATTG TCGCCACATC AGACCCGTTC AACCTCGAAG CGCTCGAAGA GCTTTCCAGC GTCAGTGGCT TTCATCTCGA GCCAGTTCTG GCGCGCAAGC TCGACGTGAT TGAGATGATT AAGGATCATC TCGGTGTCGG GGGCGATACA CTCAACCAAC TGGTGGCCCA AAGGGCTGCT GATGGTGTCG AACTTCTCAG TGAACCACTC GAACAGACTG GTGATCTCGA AGATGCCGCT GAAGCGGCCT CGGTCATCAA GCTGGTCAAC GAGTTGCTGG TCGAAGCTCT CGAAATGCAG GCCAGTGATG TGCATATCGA GCCACAGGAA AATGGCCTGA TCATCCGCTT CCGCGTCGAT GGTTTGCTGC GTGTTCAGCC ATTGCCTCCT TCGATCAATC AGTTCCAGCA GGCCATTGTC ACCCGGCTCA AGATCATGTC CCGGCTGAAT ATTGCTGAGA AACGATTGCC ACAGGACGGC CGCATCAAGC TCAAGATTAA GGGCCGCGAG ATCGACGTAC GCGTATCGAT TATCCCGATG CTGTATGGCG AAGGGGTCGT GATGCGTCTG TTGGATAAAG GCCGTATGGT CTTTAATCTG AAAAACGTGG GCATGCCGCC CATGGTCGAT GTCCCCTTCC GCCAGTTGAT CACACTCCCC CACGGAATTG TGCTGGTCAC TGGCCCGACT GGTAGTGGTA AAACGTCGAC GCTGTACAGT GCCCTCCACG AGATCAAAGA CCCGTCGGTC AAAATCATCA CGGTCGAAGA TCCTGTTGAA TACCAGATGC CGGGCATCAG CCAGATTCAG GTCCATTCGA AAATCGGCCT GACGTTTGCC GCCGGTTTGC GCAGTATTCT ACGTCATGAC CCGGATGTGA TTCTCATCGG GGAAATTCGC GATAGCGAGA CGGCTGAAGC CGCCATTCAG GCTTCGCTCA CGGGTCACCT GGTCTTCAGT ACGTTGCACA CCAACGATGC CCCGTCGGCT TTTGCACGAC TGGTCGATAT GGGTGTGGAA CCTTATCTCG TTTCGAGTAC GGTGGCGGGT GTGCTGGCTC AGCGACTGGT CCGCCGACTT TGCAAACATT GCAAGGTGCC TGTCCAGGTG AAGCCCGGAA TGCTTCCGGA CGATTTTCCC GATCCGGATT GTGAATTCAT CTACGAACCG GGAAGTTGCC GGGAATGTCG CAATACGGGG TACACGGGTC GTCAGGCAAT CTTTGAACTG CTGCTGACCG ATGCTGAAAT TGGCCGGCTA TGTATTCGCC GGGCCGCTGC GACAGAAATC CGCTCTTACG CGCTCACTGC CGGTATGGTC ACATTACGAG AATCAGGACT TTTGCGCGTC GCCGACGGCA CAACCACTCT CGAAGAAGTT GATCGTCTCG CCAAACGAGA ATAA
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Protein sequence | MNIGATLVRK GVITPDQLKE LGVPSGARVD RLVIDKGWAD EGQVLQTIAQ ELGMRFVDIK HEAIDRDLLM QFPTNAVFRH SLLPIGRNNG SVIVATSDPF NLEALEELSS VSGFHLEPVL ARKLDVIEMI KDHLGVGGDT LNQLVAQRAA DGVELLSEPL EQTGDLEDAA EAASVIKLVN ELLVEALEMQ ASDVHIEPQE NGLIIRFRVD GLLRVQPLPP SINQFQQAIV TRLKIMSRLN IAEKRLPQDG RIKLKIKGRE IDVRVSIIPM LYGEGVVMRL LDKGRMVFNL KNVGMPPMVD VPFRQLITLP HGIVLVTGPT GSGKTSTLYS ALHEIKDPSV KIITVEDPVE YQMPGISQIQ VHSKIGLTFA AGLRSILRHD PDVILIGEIR DSETAEAAIQ ASLTGHLVFS TLHTNDAPSA FARLVDMGVE PYLVSSTVAG VLAQRLVRRL CKHCKVPVQV KPGMLPDDFP DPDCEFIYEP GSCRECRNTG YTGRQAIFEL LLTDAEIGRL CIRRAAATEI RSYALTAGMV TLRESGLLRV ADGTTTLEEV DRLAKRE
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