| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4185 |
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| Symbol | |
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| ID | 9140906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5350087 |
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| End bp | 5350908 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003632193 |
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| Protein GI | 296124415 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGTT TAGGTTTGAT CAATTCTGCC TGGGGACAGG CTGGCCGCGA AACCGTCTGG
GGCCTTCAGA AAACGAAAGA GATCGGGTTT GACACGGTCG ATCTGCTCGT CGATCCCCTC
GACCTGCCCG TGACAGAAAA GCGCGCGATC CAGCGGGAAC TCGATCGACT CGAATTGCCG
CTGGTCTCCA TCTGCTGCGT TTCAGCAGGC TTGATCGATC CGTTCCCCAG CGTCCGCAAG
TTTCATCTTG ATCGAGCCGT CCAACATCTC GACCTGGTCT ACGAACTGGG AGGCGAAAAT
CTGCTGCTGG TTCTGGGCGA ATATATCTGG AATCAGGAAG TCATTCCCCC CGAAGAACAG
TGGCAGAGTG CCGTCGAGGC CTGTCAGGCA CTCGGGGCTT ATGCCGGTGA ACTCGGCCTC
AAAATCGCCC TCGAACTGGA ACCCTTCCAC CTTTCGCTGC TCAATAGCGT CGATGCCATG
GATCGCTTCT TGAACGATGT GGGCGAGCCA GCCGTCGGTG CCAACATCGA TATCTCGCAT
CTCTGCTTAG CCCATGTTCC CGCCGAAGAG CTTAAAAAAC TCAAAGGCCG GGCCTTCCAT
GTTCATATCA GCGATTGCGA CGGAAAAATT CACGGCGATC TTCCGCCAGG TCGCGGCGTC
GTCCAATTCG CCCCGTATCT GGAAGCCATT CGCGAGATGG AAATCCCCGG TGCCATTTCC
ATTGAACTCG AATACAGCCC CGACCCCGAT GCCATTGAAG CCTGGGTCAA AGAAGCCTAT
CAATCGACCA GAAAACTCCT GCAACAATCC GGCCTGTCGT GA
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| Protein sequence | MSRLGLINSA WGQAGRETVW GLQKTKEIGF DTVDLLVDPL DLPVTEKRAI QRELDRLELP
LVSICCVSAG LIDPFPSVRK FHLDRAVQHL DLVYELGGEN LLLVLGEYIW NQEVIPPEEQ
WQSAVEACQA LGAYAGELGL KIALELEPFH LSLLNSVDAM DRFLNDVGEP AVGANIDISH
LCLAHVPAEE LKKLKGRAFH VHISDCDGKI HGDLPPGRGV VQFAPYLEAI REMEIPGAIS
IELEYSPDPD AIEAWVKEAY QSTRKLLQQS GLS
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