| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4179 |
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| Symbol | |
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| ID | 9140900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5344086 |
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| End bp | 5346629 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | Polypeptide N-acetylgalactosaminyltransferase |
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| Protein accession | YP_003632187 |
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| Protein GI | 296124409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCT CGATCTGTAT CGCCGCCCAC AATGAAGCCC ACCTGTTGAG CCGAACATTC
CATGCCGTCC GCACTTCGCT GCTCGCCACG AGCCTCTCCA GTCCCGCGTT CCCCGGCGAT
ACCAACAGCG AGAGAGCGAA TCCCGGTGAC GCCTTATGCG AGATCATTGT CGTCGATGAC
GCCTCGACCG ATGGCTCCAT CGCCGCCGCT CTTGCCAACT TCCCGAACTC GGCGGAACTC
CCTCTCCGGG TCGAACGCTT CGAAACCCGC CAGGGGGCTT CCCCAGCCAA GCATCGCGCT
GCCGAGTTAG CGCGGGGAGG CGTACTGGTC TTCCTCGATG CCCACGTCTT GCCCGAACCT
GGAGCTCTGG AGCGGCTGGT GGCCGGTGTC GAGGCATCTC AGGGCCGCGA TCTTCTCACC
CCCGCCCTCC CCGCGCTGGA TGAATCGACC TTCACTGTGA TCCCCGGCCG CACGGGACTG
GGCTATGGCC TCGATCTTGC CGACCTTTCC TGCCGCTGGC TCCCGCTGTC CAATCTGCAG
CTCGACGAGG AAACCCGCCT CTATCATCAG CCCGCTCTCA TTGGCTGTGT CCTGGCCGTC
TCTCGGGAAA CCTACTTCGC ACTGGGTGGC TTCGATACGG GGATGAAGGT CTGGGGCGTC
GAAGATATCG ACTTCGGACT CAAGGCCTGG AGTCTGGGCT ATGGCCTCAA GCTGGATGTC
CTCTCCCGCG TTGCCCACCG TTTCCAGCGG GCCTTCGACC ATTATGAAGT CCCCGCTCCC
CACGTCCTCC ACAACAAACT GCGCCTGGCG GCCAAACACT TCTCCCCCCA CCATCTCCAG
CGGTGGCTCG CCAGAAACAC CCCCCTCACA CTCGAACAGC TTCTTGCTCC CGCGCCCGAC
CTGCCGGGAG AACCCCTTCT TACTCCCTCG CCCGGTCTGC CGGGAGAGGG CCGGGGTGAG
GGTGTATTCC TCCCTTCACC CGCATCCACC GATCACCTCC CTCCCCTCTG GCGTGCTGCC
CTCGATCTCT TCCACGAGCA CCTCGCCAGT CTCCAGGCAG AGCGTACGCT GGTTCAAAGC
CGCCGCCTGC GGGATGAACT CGACTATGCC CACACCTTCC AGCTTGACTG GCCCGGCCAC
GAATCAAATC CACCCCAACT CATGGCCCTG GCCATGACCC TCCCCACCAG CGAAGCAACC
GGCTCTGAAC CCAGCCCCTG GCCCAGCCCA GAACCATCCC CGGAACCATC CCCGGAACCG
TCTCCCGCAC CCTGCCAGTG TGCTGTCAGC GGCATCTCCG CCCCCGAAAC CTGCTTCGTG
GGCGATGAAG ACGACATCAC CATCACCGGC ACCTGTCTGG ACGGTCTCTC CATCAACATC
CCCGGCGGCG AATTCATCCC TCTATCATCG GAAAAGAACG CCGCAGGCCA CATCGTCGCC
ATCAAACTCC GCGTCCAATG GATCACCCCA GGCGAACACA CCCTCTCCGC CACCTGCGGC
CAGTCCTCCG CCACGACCAC GGTCAAAGTC TATAAAGTCC AGATCTTCGC CAATAGCCAG
GATGTGACTG GTGGATCGGT CGCGACAGTC GTCGGCAGAC CCATCGCACT GGAATGCCGC
GTGACCCCCA AGATGGAATT CACGAACGAG TGGGTAATTC CAGGTATTTA CGTCAAGAAA
TACAGCATAT TATACAAACC AACTGGTGAA CAAGATCGGT TTGGCAGGCT CTACACATCC
GTGAATACAA GCGGTGTTGT CGAGACGTTT CAGGAAAAAA ATGAGACCTG CTTGCCCGCG
ATCCGACTGT ATTGGATTAA GCCGCTATTT CGAGGTGAAA TCAGCGTAAT GGTAACTATT
GCTGGTCGGA GTAAATCGGC GAGTGCCAAA CCAGAAATCA GCGCGCCGAT TGTTAACATC
GTCCCGCAAA CGACTACTGA CGTACCTCCA GTTTTTGTTG ACGAAAATGT TCTGAAGTTT
GGTAAAATCT CGAAAGGTAT CACTGTCTCG GCATTATGTG CAACGGGTTC TGACGGAGCC
GGCGAATTTC GATTTCTGCA AAGAGTTACG TTTGATCGAA CTGTGACACG TCGGCAAGAG
TTTGCAACTC AAATCAGAGA TTCGACGGAG AGGACGCGAA CGACCGAGCG GGTGTTGGAT
CGGAAAGATG AAATCCAGGA CGCCTGGCAT TTCCAGAATC GATCCTTGCA TCTCAACAAC
ATCGATGCAG GAGGGATCAC CATGACCGAT TCACCCGAGA TCACGACATT AAGAACCGCT
ATCTCAGCAT CCGTTGCGGA TGAAACATTC GATCTTCGTC TAATGTATCG CCCCGATGGC
GAGGATAGCA TTTGGGTTTC CCTCAAGACC ATCACATGGG GCTGGTCGGC AATGGCCTCA
GGGGTTCCGG CATTTTCACT CGCCATCATC GGAAATCCCG TCATCAAGTC AATCAATGTC
GAAGATTCAG TGGACTTACC AATTTGGTCA ATGCGAGCAT TGGACGTACC GTTGGAACGA
AGCACAGTCA CAACATCGAG ATAA
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| Protein sequence | MRFSICIAAH NEAHLLSRTF HAVRTSLLAT SLSSPAFPGD TNSERANPGD ALCEIIVVDD
ASTDGSIAAA LANFPNSAEL PLRVERFETR QGASPAKHRA AELARGGVLV FLDAHVLPEP
GALERLVAGV EASQGRDLLT PALPALDEST FTVIPGRTGL GYGLDLADLS CRWLPLSNLQ
LDEETRLYHQ PALIGCVLAV SRETYFALGG FDTGMKVWGV EDIDFGLKAW SLGYGLKLDV
LSRVAHRFQR AFDHYEVPAP HVLHNKLRLA AKHFSPHHLQ RWLARNTPLT LEQLLAPAPD
LPGEPLLTPS PGLPGEGRGE GVFLPSPAST DHLPPLWRAA LDLFHEHLAS LQAERTLVQS
RRLRDELDYA HTFQLDWPGH ESNPPQLMAL AMTLPTSEAT GSEPSPWPSP EPSPEPSPEP
SPAPCQCAVS GISAPETCFV GDEDDITITG TCLDGLSINI PGGEFIPLSS EKNAAGHIVA
IKLRVQWITP GEHTLSATCG QSSATTTVKV YKVQIFANSQ DVTGGSVATV VGRPIALECR
VTPKMEFTNE WVIPGIYVKK YSILYKPTGE QDRFGRLYTS VNTSGVVETF QEKNETCLPA
IRLYWIKPLF RGEISVMVTI AGRSKSASAK PEISAPIVNI VPQTTTDVPP VFVDENVLKF
GKISKGITVS ALCATGSDGA GEFRFLQRVT FDRTVTRRQE FATQIRDSTE RTRTTERVLD
RKDEIQDAWH FQNRSLHLNN IDAGGITMTD SPEITTLRTA ISASVADETF DLRLMYRPDG
EDSIWVSLKT ITWGWSAMAS GVPAFSLAII GNPVIKSINV EDSVDLPIWS MRALDVPLER
STVTTSR
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