| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4110 |
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| Symbol | |
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| ID | 9140830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5270195 |
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| End bp | 5272987 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | O-antigen polymerase |
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| Protein accession | YP_003632120 |
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| Protein GI | 296124342 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCGA CGCATGCCGA ACATCGCTCG CACCGTTCCT CGAGGCGATC CTCCAGCCGC
CATCGCGAGA GTCATGCTCG CACCGCACTT AATGAGCACT CTTCAGTCAG GCATTGGACG
CTGCTCGATG TGGCACTGGT GCTCCTGGCT TTCGCGATTC CTTTCATCAT GGGCGGTCGC
GAGCCTTATG GCTGGATTGC CCTGGCCATA CTGGGCCCGC TGGCCGCTGG GTTGTGGTGT
TTACGCCAGA TCGTGACCGA TGAACCCACG CCTCTGGTCT GGTCGTGGAT GTATCTACCA
ATGGCGTTTG TGGCCGGTGT CATGTTTCTA CAACTGACAC CCCTTCCCGA AGCCACTTTG
AAATCGATCT CGCCTCAACT GACCACTCTG GTATCACTTT CACCGGGCAC AGGAGCCGCC
TCGACGTGGA AGCTGCTCAC GGTTGCTCCC CACGAATCGC AGCAGGGATT GATTCTCTTC
CTCTCGACCG CGCTGGTCTT TGCCATGACT TATCAGCATC AGAGGCAAAC CAGCGATGCC
TGGCGTGTCC TGGGGATTAT CGCCTGTGCG ATCATCGCCA TGGCTTTGTT TGCCCTGTTG
CAGTTTTTTG CAGGCACTAA TCTGTTTTTT GGCTTCTACG AACATCACTT TGGCACAGCA
AAAGATGTCG TCAAAGGGGC CTTCACCAAT CGTAATAACT TCGCCCATTT TATGGCCATC
GGGATCGGCC CTGTCCTGGC CTGGATGTGC TACTGGCACA TGCAGCATCA ACAACCAGCA
GATCAACCGT CGACGGGCGG ATTCTCTTCA CCAGGCTTTG GCAAAACTTC GGGAATCTCG
ATCGCCCTGA TAATGGCCGG ATTATTAGCT GTCAGTGCAA TTGTCATCAG TTTTGCTTCG
TTGCGATCAC TCTCCCGCAT GGGCTCCATT GTGACGATCC TGGCCATTCT GACCTTCATG
ATTTCTGGCA GCTTCGCCAG ATTAATCTCC TTTCGAATGC TCATGGGTGG TCTGCTGGCC
TGTGCTCTCG TGGCTGGTGG CCTGGTCATT TTCAAGCCGG AATTTATGAG TCTGGATGAA
AAAGTCGAAG TCGCCATCAG TGGTGGCATT GAAGAAATGG ATGGAGAAGA CGGTCGGCGA
AAACTGTGGC AGGCCCTCAC AGTGATGATC AAAGACTTCC CTCTCGTCGG TAGTGGCCTG
GGAAGTCATC GCGAAATTTA TCCGGTCTAT CTCCCTAAAA AAGATGGTGA GACCGAATAC
ACCCATGCAG AAAATGGCTA TCTGCAGATT GCCGTCGAAC TGGGGCTCCC GGCACTCGCC
TGTGCGATCC TCGCTCTGGT CATCGTCTTT GCAGCATCGA TCCGGCTGCA CCTGGCCAAA
GATCAGGAGC TTCGGCTCAT TGGTGTCGCC ATTCTCTCTG CGGCTGTGGC GACGACCATA
CATTCCGTGA CGGATTTTGC ATGGTATGCA CCGGGAAACA CCGTCATTCT GGCCATGCTC
GCAGCTGTCG CCTGCCGTTG TGATGCATTT GCCCGCTTGC AACCCAAAGG GACTTCCTCA
GAAGTTTCAT CCGCAGTCCC AGCTTTGCCC GGGCTGCAGT TACCACAATG GTTTTATGCA
GCCCCACTGG CACTGACAAT TCTCGCGGGA ACCTGGTGGA CTCTCGAACT CACACCCGTG
GTGAAGGCCT ACACACAATT CCGTCAGTTT CAACTCCTCG TTTTTCGACC GCGCCCCGAT
ATCGAACCTC AAGAGATCAA TACTCTCAAA CTGAAGCATA TTCTGGCAGC CACCAAACTC
GATCCGGCTG ATGGACGCTA CGCCATTCTG GCCTCTTTGC AGCTCAAGAA CTTCTTTATC
GAACTGCAGG AACGCGATCC CGAAAATGCC ATTCCTCTGG CTCAATTGCA GCAGACAGCA
GGCTCGGGTG GATTTGAATC GAACGCCCAA CTCCGCGAAT GGTTGCAACG GGTGGTTGGC
CCATCATTGA AATACATCGA TGCCTCCCAT CAACTCGCCC GCCGATCGGT TCGTTCGCTG
CCATTAACAG GAACCGCTTA CCTGCAGATG TATGAACTCG GGTTTCTGCA AGGTTCATCA
GCAGAACAAT CCCGCAATAT GCTCGAACAG GGACTCGTTG TCAGACCGTA TGCCTCGAAC
CTCTTGCTGG CGAAGGGAAC CGCACTGATT ACCTCAGGGG AAGCAGAAGC GGGGATGGCA
TTGTGGAAGC AGGTCTTTGT CGATTACTCA AGTGCCAGAC GACAGATTAT CAATCTCCTT
GCACCATCGA TTCCTGCTCA GGAATTGATC GCTCAGTTCG AACCCGACAG CAAAGCGGCC
AGTGATATTC TCGCTGCCTA CACCAAACTC AAAAAGGAAG CAGACGTCGT TCTCGCTGCC
GATGCACTCG GGAAAATTCT CACCAGAGAA TCCGATCAGG CAGCACCAGA AATTGCCCGC
GGCAAGCTGA TCTCAGCGGC CTATCAGTTC TGGAATGCGA AAAATCTGGC GGCTCTCCGT
GAGACTCTGG CAAAGGTCGA AGAACTCCAT CCCGAAACCG TAGCTCAACA TCGCGATCTG
GGTGGTTTAT ACATGCGACT TCAAGAGTGG GATTCTGCCG AAAGGCATTT GAAGCGTTGT
GTCGATCTGC AGCCCGCAAA TCCCGCTTAC GCCAAAATGT ACGAATCTGT GCTCCGCTCC
AGACAATCCG CTCAACGTTC ACTTTCTCCC CGCACATCAC TCGTGATACC GGCTGGTCAT
CAGACTTCGC CATCATTATC TCCCCTCCGA TAA
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| Protein sequence | MDATHAEHRS HRSSRRSSSR HRESHARTAL NEHSSVRHWT LLDVALVLLA FAIPFIMGGR
EPYGWIALAI LGPLAAGLWC LRQIVTDEPT PLVWSWMYLP MAFVAGVMFL QLTPLPEATL
KSISPQLTTL VSLSPGTGAA STWKLLTVAP HESQQGLILF LSTALVFAMT YQHQRQTSDA
WRVLGIIACA IIAMALFALL QFFAGTNLFF GFYEHHFGTA KDVVKGAFTN RNNFAHFMAI
GIGPVLAWMC YWHMQHQQPA DQPSTGGFSS PGFGKTSGIS IALIMAGLLA VSAIVISFAS
LRSLSRMGSI VTILAILTFM ISGSFARLIS FRMLMGGLLA CALVAGGLVI FKPEFMSLDE
KVEVAISGGI EEMDGEDGRR KLWQALTVMI KDFPLVGSGL GSHREIYPVY LPKKDGETEY
THAENGYLQI AVELGLPALA CAILALVIVF AASIRLHLAK DQELRLIGVA ILSAAVATTI
HSVTDFAWYA PGNTVILAML AAVACRCDAF ARLQPKGTSS EVSSAVPALP GLQLPQWFYA
APLALTILAG TWWTLELTPV VKAYTQFRQF QLLVFRPRPD IEPQEINTLK LKHILAATKL
DPADGRYAIL ASLQLKNFFI ELQERDPENA IPLAQLQQTA GSGGFESNAQ LREWLQRVVG
PSLKYIDASH QLARRSVRSL PLTGTAYLQM YELGFLQGSS AEQSRNMLEQ GLVVRPYASN
LLLAKGTALI TSGEAEAGMA LWKQVFVDYS SARRQIINLL APSIPAQELI AQFEPDSKAA
SDILAAYTKL KKEADVVLAA DALGKILTRE SDQAAPEIAR GKLISAAYQF WNAKNLAALR
ETLAKVEELH PETVAQHRDL GGLYMRLQEW DSAERHLKRC VDLQPANPAY AKMYESVLRS
RQSAQRSLSP RTSLVIPAGH QTSPSLSPLR
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