Gene Plim_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4067 
Symbol 
ID9140787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5221142 
End bp5222161 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content54% 
IMG OID 
Productflagellar biosynthetic protein FliP 
Protein accessionYP_003632077 
Protein GI296124299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC ACCAACTGGC ATTGTCACTG GTGGCTCTCG GCACTTGCTG GCTGGGAATG 
CTGATTTCTC CAGGCATGGC TCAGGCTGTA CTGAAGGAAG ATGCACCTGG CGTCATCCGT
TCCAACCGAC CCACTGCGAC AAATGAGCTC CGTCCAGCTG TTGCGCCAGT GCAACTGTCG
AGCCCGGCAC TCGTAAGAAC TGGTGCCGAA GGTAACGCAC CTGCCGATTT CAACAGTGGT
GAAAACAGCA CGCTCGCATT TCCTCCAGGC TTGGCTGCAC CAGCCCTACC AACCGGACTG
GACGCCTCGA ATCTGACTTC TCGGAGCGGG TTGTCGAACA CACTCAAAAT TATGTTCCTG
CTGACCGTGC TCACTCTGGC ACCCAGCATT CTCATGATGA CAACCTGCTT CATTCGCTTT
GTGATTGTGC TCGGATTGTT GCGGCAGGCA CTGGGAACAC AACAGTTGCC TCCCAATCAG
GTGATTACTT CGCTCTGTCT GTTTCTCACA TTTCTCGTGA TGGCACCTAT CTGGCAGGAA
GCTTATGAAG CGGGCATCAG GCCGTACACC GCACCTCGTG CGGGTGAAGC AGCGATTGAT
GAGTGGACAG CGTTCAATCG CACTTTAGTT CCAATCCGCC GCTTTATGGC CGAACAGATT
GACCGCACGG GGAGCAGTGA TTCGGTCTGG ATGTTTATCG ACTTCATGCG GCCACCCCAA
GACAGCCCGG CTCTGAGCAC ATGGAAAGAA CCCACCACCT ACGAAGACGT GCCACTGGTG
GCATTGTTAC CCGCCTATGT TCTCAGTGAG TTGAAAGTCA GCTTTCTCAT TGCGTTCCAG
ATCTATCTGC CGTTTCTGAT TATCGACATG GTCATTTCCT CCATTCTGAT CAGCATGGGG
ATGATGATGC TCCCCCCTGT GCTGATTTCT CTCCCGTTCA AGCTGCTGCT GTTTGTGATG
ATTGACGGCT GGTTCCTGAC GGTTGGCATG CTGCTAGAAA GTGTCAGACC CTCCGGATAG
 
Protein sequence
MKLHQLALSL VALGTCWLGM LISPGMAQAV LKEDAPGVIR SNRPTATNEL RPAVAPVQLS 
SPALVRTGAE GNAPADFNSG ENSTLAFPPG LAAPALPTGL DASNLTSRSG LSNTLKIMFL
LTVLTLAPSI LMMTTCFIRF VIVLGLLRQA LGTQQLPPNQ VITSLCLFLT FLVMAPIWQE
AYEAGIRPYT APRAGEAAID EWTAFNRTLV PIRRFMAEQI DRTGSSDSVW MFIDFMRPPQ
DSPALSTWKE PTTYEDVPLV ALLPAYVLSE LKVSFLIAFQ IYLPFLIIDM VISSILISMG
MMMLPPVLIS LPFKLLLFVM IDGWFLTVGM LLESVRPSG