| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4065 |
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| Symbol | |
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| ID | 9140785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5219733 |
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| End bp | 5220737 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_003632075 |
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| Protein GI | 296124297 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCCT TGCCCTGGAC AGAATGGCTG CTGACCGAAG CCACTTTTCA GTTCCAGATC
TTTCTGCTGG TGCTGGTCAG GCTCTCAGGC CTCGCATTGA CTGGCCCGAT CTTCGGTGCC
CCTGCCGTGC CCACGAATAT CCGCGTACTG CTGATTTTTG TACTGGCACT TCTCGTGACA
CCGTCCATCG GCCATCAGGC GGCTCAAGGG TTTTCGCTGC GAGATGGCAA CCAGGATCAG
CGATTAACCA GCGACGAAAT TCCCCCGGCA CTCGCTGAGC GATTTCTCGC AGAGTCATCA
AACACACCGG CATCTGCCGA GCTTTCGACG CCTGATGATC GAGTCATGAC AGCCGCGGAA
TACTCAGCAC TTCCCACACC TCCAGAAAAC CTGGGGCAAC TCGTGCTCGT GCTTCTGGGA
GAACTGGTGA TCGGGTTGTT CTTAGGGTTG GGTGTGCAGA TGGTGCTGGC TGGTCTGCAG
ATGGCAGGGC AGATCATTGA TCAGCAGGGA GGGTTCGGAC TGGGTGAAGT CTTTAACCCA
GACTTGCAAA TGAATGCCTC GCAAAGTGGG CAACTCCTCT TCTGGCTGGG GACAGTCATC
TTTCTGGTGC TCGAACCTCT GGGCGGGCAT CTCGTCATGT TGAAATCAAT GGTCGAGAGT
TTTCAGTCGA TCCCGGTGGG ACGGGCCTTC TGGGAGCCGG GAACTGTGGA ACTGTTAAAC
AATCTGATGC AGGCCTCGTT CTCGCTGGCC ATACGCTTTG CCGCACCCAT CATGCTCGTG
ATGTGCCTGG TCGATGCCGC CATTGGTTTT TTGAGCCACA CCGTTCCGCA AATCAATATT
CAGGCCGTCG GGTTCTCACT CAAGGCCATG GTGAGCCTGC TCCTGCTGAT CACACTTTTC
AGTACCTCGC CGGCTGTCAT CGTGAATGCG TTTCAGGAAA CCTTTTTCGT CTTAAGGCAA
GGACTCTCCC TGCCTGAAGT CATCACGATT CCACCCTCCG GTTAA
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| Protein sequence | MPALPWTEWL LTEATFQFQI FLLVLVRLSG LALTGPIFGA PAVPTNIRVL LIFVLALLVT
PSIGHQAAQG FSLRDGNQDQ RLTSDEIPPA LAERFLAESS NTPASAELST PDDRVMTAAE
YSALPTPPEN LGQLVLVLLG ELVIGLFLGL GVQMVLAGLQ MAGQIIDQQG GFGLGEVFNP
DLQMNASQSG QLLFWLGTVI FLVLEPLGGH LVMLKSMVES FQSIPVGRAF WEPGTVELLN
NLMQASFSLA IRFAAPIMLV MCLVDAAIGF LSHTVPQINI QAVGFSLKAM VSLLLLITLF
STSPAVIVNA FQETFFVLRQ GLSLPEVITI PPSG
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