Gene Plim_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4053 
Symbol 
ID9140773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp5205044 
End bp5205778 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content56% 
IMG OID 
Productprotein of unknown function DUF1080 
Protein accessionYP_003632063 
Protein GI296124285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0552867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGTG TCGCTGCGAT GACCTCGCCC GCTCTTCAAG CTGCAGAAAT CGTTCGCGAA 
ACCTTCGACG ACACCGGCTT CGAATCGATC TTCGACGGCA AAACACTCGA TGGCTGGCAT 
GTCAGCACCA AGACGGGGCA CAGCCGGGCG AGTAAGAACA CCACGGGTGG GAAATGGGTG 
GTGGAAGATG GCGCGATTAC CGGCTCCCAG GATATCCCTG CCAATGGCGG CATCATCATC 
ACCGACAAGC AGTACGGCGA CTTCGAAGTC GTCCTCAAAA TGAAGAACGA CTACGGCCCC 
GATAGCGGCC TCTTCCTGCG CAGTACCGAA GATGGTAAGG CCTGGCAGTA TATGATCGAC 
TATCATAATG GCGGGAATGT CGCCGGTATC TATGGCGAAG GCTTAGGGGG CAAGCCTCAC 
TTAAGGAACT ACGACTTCCT CGATGCTGTT ACAAAGATCA AGACCAAGGA CGCCCCGGTC 
GCCGCACCGG TCTCGGCGGA AGAATGGCCC GAGTTCTGGA AGCACGGCGA ATGGAACGAA 
CTCCGCGCCC GGATTGAAGG CAACCCACCG ACCATTACCA CCTGGATTAA CGGCGTGAAG 
TTCATGAAAT GGACCGAAAC CGAACTCCGC CACCCCGAAA AAGGCGGCAT CGCGCTCCAA 
GTCCACGGCG GCGGCAACTT CGTGGATCAG TATGTGCGGT ATAAGGATAT TAAGGTGAAG 
GTGCTCGGGA AATAA
 
Protein sequence
MLSVAAMTSP ALQAAEIVRE TFDDTGFESI FDGKTLDGWH VSTKTGHSRA SKNTTGGKWV 
VEDGAITGSQ DIPANGGIII TDKQYGDFEV VLKMKNDYGP DSGLFLRSTE DGKAWQYMID 
YHNGGNVAGI YGEGLGGKPH LRNYDFLDAV TKIKTKDAPV AAPVSAEEWP EFWKHGEWNE 
LRARIEGNPP TITTWINGVK FMKWTETELR HPEKGGIALQ VHGGGNFVDQ YVRYKDIKVK 
VLGK