Gene Plim_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4008 
Symbol 
ID9140728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp5148007 
End bp5148570 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID 
Productprotein of unknown function UPF0074 
Protein accessionYP_003632018 
Protein GI296124240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGC GGTTTACTGT TGCGGCTCAT GTGCTGGGGT ATCTGGCCTG GCAGGGTGAG 
CAAGGTGTGG AGTGGGTCTC TTCGGATGAG TTGGGGCGAA GTATCAATAC CCATTCGGTG 
GTTGTCCGCC GGTTGCTGAC CCAGTTGCAG AAAGCGGGGT TGATTGAAAC TCGTCGCGGG 
GCGAGCGGTG GCTCGCGTTT GGCCCGGCCC GCCAGTGCGA TTCATCTGGG AGAAGTCTTT 
GATGCCGTGG TGGAATCTGG CACATCGCTG ATCAGTTTTC CACGCGAAGT CGAGCGGGAT 
GAATGCTTGG TCGGAGAACA TATTGAAGCT GTGTTGCGAG AGGTGATTGC TGAGGCCGAA 
GCGGTCTTCC GCCGGAATCT GGGACGCACC AGCGTGGCAG AATTCTCGCA GATGGTTGTC 
AATCGCATGA TCAAACTGGG AATCTGCTGC CCCTCGGAGG AAGAACGCCA ACCAGCGGCT 
GCCAAAAAAC ACTCCCAAAC CATTCGGCTG GTTGAAAAGA CCAAAGCCGT ATCGGGTTCA 
CGAAAAGGCA AAACCACACG CTGA
 
Protein sequence
MDTRFTVAAH VLGYLAWQGE QGVEWVSSDE LGRSINTHSV VVRRLLTQLQ KAGLIETRRG 
ASGGSRLARP ASAIHLGEVF DAVVESGTSL ISFPREVERD ECLVGEHIEA VLREVIAEAE 
AVFRRNLGRT SVAEFSQMVV NRMIKLGICC PSEEERQPAA AKKHSQTIRL VEKTKAVSGS 
RKGKTTR