| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4003 |
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| Symbol | |
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| ID | 9140723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5138069 |
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| End bp | 5141140 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | protein of unknown function DUF1355 |
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| Protein accession | YP_003632013 |
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| Protein GI | 296124235 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0902905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCAAC AAGCACAGTA CCTGCTGATG CGACTTTTTC CACCGGCTCG CAAGCCAGTG
ACGCCCTGGA CTGTTGCGCC ATTACTCATC TCGATGGTCT TGACCGTGGG CATTGCCTTC
TGGCTGGAGG CCAGTCGGGT GTTACTGTTG ACCCGGCCAT GGTTACTCTC GCTGGTGGTC
TTGAGTGTGT GGGTCTGGTG GCTGCACATG GCGGGGATGC CGGGCTTACC GTGGCTGCGA
TCCTGGATGG CACTGTGGGT TCGTCTGGCG ATGGTCGGAA TCCTCGCATT TCTGCTGGCT
GAACCCCGCG CTGTTCGTGA GAACGACCGA CAATCACTGA TGTATGTGCT GGATACGTCC
GATTCGATCG GCCGCTCAGC CAAGGATCAG GTGCTGCGCT ATATTGCAGA AACTGTCACG
AAAAAACCGG CTCGCGATGA AGCCGGGCTG TCAGTCTTCG GGCGTAACGC GGCTGTGGAA
TTACCACCTC GTACCACGTT TCTGGCCGAG GCACTCAATA CCGATATTCG TGGTGATGCC
ACCAATATCG AGCAGGCACT TTCCCTTTCC AGCGCCATGC TGCCGGATGA TCAGGCGGGG
AAGATTGTGC TGTTTTCCGA TGGATCTCAG ACTGAAGGGA GTCTCGACCG TATTCTCGAT
GAACTGAAAT CCCGTAAGAT CTCTGTCGAT GTGGTGCCTA TTGAATATGA CTACGAACAT
GAGGTCTGGG TCGAGCGAAT TGATCTTCCG AGCAACGTCA AGATTGGCGA GACCTATGAA
GCGGCGGTGA TCGTCTCGGC CTTGTCGGCT GGTCAGGGCA AGCTGGTTGT TCGCGAGAAC
GGCCAGCCGA TTGTGGAAGA AACGATTTCG TATCGCGAAG GGAAGACACG CCTGGCAGTC
CCGCTCGCCT TACGCCGGCC CGGATACTAT GAATATACCG CCACCATTGA ACCCGAGGCA
GAAGCTGACA GCCTGGCGCA AAACAATATG GCCATGGGTG GGATTGTCGT CGAAGGGGAG
GGGAAAATCC TCGTTGTTTA CGATCCCACG GGGAATCCAC TCGATTGGGA ACCACTGGTC
GAGTCTCTCA ATAAGGCCAA AAAACAAGTT GATGTGATGG CCGGAGTCGA CTTTCCGCGA
GACCCTTCCT CACTGATTCC TTACGACTCG ATTTTGTTTG TGAATGTCCC TGCCAATGAG
TTCGATGGCG TTCAATTGCA GGCACTCAAA GACAGTGTTT TCGATCTGGG AACTGGCTTT
CTGATGGTCG GTGGGCCGGG GAGCTTTGGC CCCGGGGGAT ATCACCGGAC GGCTGTCGAA
GAGATTCTTC CCGTCACGAT GGATATCACA CAGAAGAAGG TGCTTCCTAA GGGAGCACTG
GCCATCATTC TGCATACCTG TGAATTCCCG GAGGGCAATA CCTGGGGCAA GCGAATCACC
AAGCAGGCCA TTAAGGTTCT GGGCGAACAG GATGAAGTGG GCGTTCTGGC CTATGACTAC
AACGATGGTG AGAAATGGAT TTTTGAACTC ACACCCGCAG GAAAGTACGA AGAGCTGTCG
TTACTGATTA ACTCAGCTGA GATTGGGGAT ATGCCCAGTT TTCAGCAGAC GATGCAGATG
GGTATCGATG GACTCGAAGC GAGCGATGCT TCGTCGAAAC ATATGATCAT CATTTCCGAT
GGAGATCCTT CACCAGCCTC GCCCGATCTC TTGAAGCGAT TTATTGACGC GAAGGTGACC
ATCAGCACGG TCGCTGTCTT TCCACACGGA GATGTGGATA CGCCGACGAT GACATCGATC
GCACAGATTA CTGGCGGGCG TTATTACAAG CCGACCAATC CGAATCAGCT ACCAGCGATC
TTCATCAAAG AATCGAAGAC ACTCCGCCGG TCGATGCTTC AAAACCGCGA TTTCTTCCCG
GAAGTTGCTT CGAGTTCGCC AGTTTTGAAA GGCATCAGTT CATTACCGGA GTTGAAAGGG
TATGTACTCA CGACCGCCAA GCCCGATGCT CAGGTTGTGC TCAAAGTTCC GCCCGGTTCG
AAAGAGGAAG AGTCGCAGCT GGATCCACTT CTGGCGATTC GCCAGCACGG GTTAGGGAAG
ACGGCGGCTT TCACTTCGGA ACTTGGCAAG AACTGGGGAA AGGACTGGGT GGCATGGGGC
AAGTATGAGG ATTTCCTCAA TCAGCTCACC ACGGATATCG CCCGCATCCG CAAAGACACA
CAACTCCGCT TGAGCACGTA TGTCGAAGGA GCGCAGGGAG TCGTTATTGT CGAAGATTTT
GCCCCGGAAG AGGGCTTTCT GGAAATCTCC GGACGCGTCG GTGGCCCGAA CGATCGTTCG
GAAAGCCTCA CTTTCCGGCA GGTGGGGCCG CGTCGCTATC AGGCGCTGGT TCCGCTGTGG
GGGCAAGGCC GCTACTACGT TTCGGTGGCA GGTGCGGGAA CAAAAATCGG CGTGGACGGT
CAACCGGCTG AGCGGAAGGA ATCGACGTTT GGCGGATTCG TGCTGGCCTA CTCGCCGGAA
TATCTGCGGT TTGGATCGAA CCGGCAGTTA CTCGAAGAGA TTGCCCAAAG GACAGGTGGG
CGCGTCTTGA CGGGTGATCC AGAAAGTGAC GAACTCTTCC CGAAAGAGCG CGAACCCCGC
CAGAGTTCAC GTCCGATTTT TGACTGGTTT CTTGTGGCGC TGGCCTGTCT TGTCCCTCTC
GATGTCGGTT TGAGGCGCAT TCAGTGGGAT TGGTCTGTCG TGGCAGGCTG GTTCAGACCC
CGCCGGGAAG TCACCTCGAC AATGTCAACT TTGCTCGATC AGAAAAAGTC CGGTTCGCAG
CAGACAACCA CTGAGACCGG CAAACCTGCC GCTGAGGCAT CGTCATCGCG GAAAACACCA
CCACAACGGC CACCCGTCAT TCGCAAGCCA CCGATGACTC TACCGCCATC ACCATCTGCA
AAGACTCCCC CCACTTCAGA AAAAACGCAA ACCGAAAAGC CGGCACCAGG TGCTGCCAAA
TCGACTTATG AAAAACTGCT GGAGATCAAG CGACAACAGC AGAAGAAAGA CGAACCACCC
GCGAAAGATT AA
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| Protein sequence | MWQQAQYLLM RLFPPARKPV TPWTVAPLLI SMVLTVGIAF WLEASRVLLL TRPWLLSLVV
LSVWVWWLHM AGMPGLPWLR SWMALWVRLA MVGILAFLLA EPRAVRENDR QSLMYVLDTS
DSIGRSAKDQ VLRYIAETVT KKPARDEAGL SVFGRNAAVE LPPRTTFLAE ALNTDIRGDA
TNIEQALSLS SAMLPDDQAG KIVLFSDGSQ TEGSLDRILD ELKSRKISVD VVPIEYDYEH
EVWVERIDLP SNVKIGETYE AAVIVSALSA GQGKLVVREN GQPIVEETIS YREGKTRLAV
PLALRRPGYY EYTATIEPEA EADSLAQNNM AMGGIVVEGE GKILVVYDPT GNPLDWEPLV
ESLNKAKKQV DVMAGVDFPR DPSSLIPYDS ILFVNVPANE FDGVQLQALK DSVFDLGTGF
LMVGGPGSFG PGGYHRTAVE EILPVTMDIT QKKVLPKGAL AIILHTCEFP EGNTWGKRIT
KQAIKVLGEQ DEVGVLAYDY NDGEKWIFEL TPAGKYEELS LLINSAEIGD MPSFQQTMQM
GIDGLEASDA SSKHMIIISD GDPSPASPDL LKRFIDAKVT ISTVAVFPHG DVDTPTMTSI
AQITGGRYYK PTNPNQLPAI FIKESKTLRR SMLQNRDFFP EVASSSPVLK GISSLPELKG
YVLTTAKPDA QVVLKVPPGS KEEESQLDPL LAIRQHGLGK TAAFTSELGK NWGKDWVAWG
KYEDFLNQLT TDIARIRKDT QLRLSTYVEG AQGVVIVEDF APEEGFLEIS GRVGGPNDRS
ESLTFRQVGP RRYQALVPLW GQGRYYVSVA GAGTKIGVDG QPAERKESTF GGFVLAYSPE
YLRFGSNRQL LEEIAQRTGG RVLTGDPESD ELFPKEREPR QSSRPIFDWF LVALACLVPL
DVGLRRIQWD WSVVAGWFRP RREVTSTMST LLDQKKSGSQ QTTTETGKPA AEASSSRKTP
PQRPPVIRKP PMTLPPSPSA KTPPTSEKTQ TEKPAPGAAK STYEKLLEIK RQQQKKDEPP
AKD
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