Gene Plim_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3993 
Symbol 
ID9140713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp5123848 
End bp5124411 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003632003 
Protein GI296124225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.115102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCCC GACGTGTCAT AGTGCAGGTA GAGATTGGTG TCTACCTGAT GATTGCCTCT 
TTGGCGATCT TCTTTATCAG TGGGATTGCG GCATTTGTGA TCGTTCGCAA TCGCCTGCCT 
GAAACTGCCA CCGATTCTGG CGATTTTCCC ATCGGGCTGT GGATCTCGAC GGCGTTTCTA 
CTGGCAGGGA GTGTTTCGAT TCAGAAAGCA CTTTCGGCCG TCAAACGCGA GAGACAAAAG 
CCCTTTCGGC AGTGGCTCAT CGCGGCTGGG GTTATGGGCA CACTGTTTCT CATCTCACAA 
ACCATCAGCC TCTGGCAATT GCTTGAAATC CACTGGCAGG TACTGAAGGA AACCCGCATC 
TGGGGGTTTC TATTCCTGCT CATCCTGTTG CATGCCGTCC ATTTTGTGGC GGGTCTGGGT 
GTGCTGTACG CCGTGATCTA CTACAGCCTC AAAGGACGCT TCGATCATGA GTACTACAGC 
AGTGTGAAAA TGACTGCTGT TTATTGGCAT TTTCTCGATG TGGTGTGGAT TGCCATGCTG 
ATCATGTTCC TCATGACCAC CTGA
 
Protein sequence
MPARRVIVQV EIGVYLMIAS LAIFFISGIA AFVIVRNRLP ETATDSGDFP IGLWISTAFL 
LAGSVSIQKA LSAVKRERQK PFRQWLIAAG VMGTLFLISQ TISLWQLLEI HWQVLKETRI 
WGFLFLLILL HAVHFVAGLG VLYAVIYYSL KGRFDHEYYS SVKMTAVYWH FLDVVWIAML 
IMFLMTT