Gene Plim_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3975 
Symbol 
ID9140695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5098525 
End bp5099280 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF558 
Protein accessionYP_003631985 
Protein GI296124207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGAT TTTTTCATCC CGAATTGCTG AAGCCTCTCG ATTCTGGAGA ACTCCTCCTG 
GAAGGATCGG AAGCGCATCA CGCACTCCAT GTGCTGCGTG TTAAAACAGG TCAGCAAATT
GTGCTCTTTG ATGGGCACGG AAACTCGGCT ACAGCCGAAG TCATCCGTCC CGGTCGCAAA
GATGTCGGTC TCAGAATCGT GAGTGGCATC CAGCACTCAT CACCACCCGC TCTGCAATTG
ACACTGCTGG TCGCGACTCC CAAAGGGGAT CGGCTCGATT GGATGGTTGA AAAGCTGACA
GAACTGGGCG TATCGAGATT TGTTCCGCTG ATCACTCAAA GATCGGTCGT CGATCCGCGA
GAAAGCAAAC TGGAAAGACT CCGGCAAACC GTGATCAGTG CCTGTAAACA ATCCCATCGC
GACTGGCTGA TGGAGATCGA AGAACCAGCG CGCTTGACCG ACTGGTTGAA CAGGAAAGAC
CATCCGACCC AATGGTTCGG CAGTTTGCAA GCTCCGCTTG TCGCTCGAAA AGCCTCCAAC
GATTCACAGC CGATCGCCTC TGCAAATTCC CGCATGCCAT TAGAAAATAC ATCGTTAGCG
ATTCTGATTG GCCCGGAAGG GGGCTGGACT TCTGAAGAAG AATCGCAATT GATGACCTCT
GGTGCGCGCC CTGTGCGACT GGGGCAATTT GTATTGAGGA CAGAGACAGC CGCAATTGCG
CTCACATCGC TCGCCCTGAA TGAATTCTCA CTTTAA
 
Protein sequence
MSRFFHPELL KPLDSGELLL EGSEAHHALH VLRVKTGQQI VLFDGHGNSA TAEVIRPGRK 
DVGLRIVSGI QHSSPPALQL TLLVATPKGD RLDWMVEKLT ELGVSRFVPL ITQRSVVDPR
ESKLERLRQT VISACKQSHR DWLMEIEEPA RLTDWLNRKD HPTQWFGSLQ APLVARKASN
DSQPIASANS RMPLENTSLA ILIGPEGGWT SEEESQLMTS GARPVRLGQF VLRTETAAIA
LTSLALNEFS L