Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3975 |
Symbol | |
ID | 9140695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 5098525 |
End bp | 5099280 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | protein of unknown function DUF558 |
Protein accession | YP_003631985 |
Protein GI | 296124207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGAT TTTTTCATCC CGAATTGCTG AAGCCTCTCG ATTCTGGAGA ACTCCTCCTG GAAGGATCGG AAGCGCATCA CGCACTCCAT GTGCTGCGTG TTAAAACAGG TCAGCAAATT GTGCTCTTTG ATGGGCACGG AAACTCGGCT ACAGCCGAAG TCATCCGTCC CGGTCGCAAA GATGTCGGTC TCAGAATCGT GAGTGGCATC CAGCACTCAT CACCACCCGC TCTGCAATTG ACACTGCTGG TCGCGACTCC CAAAGGGGAT CGGCTCGATT GGATGGTTGA AAAGCTGACA GAACTGGGCG TATCGAGATT TGTTCCGCTG ATCACTCAAA GATCGGTCGT CGATCCGCGA GAAAGCAAAC TGGAAAGACT CCGGCAAACC GTGATCAGTG CCTGTAAACA ATCCCATCGC GACTGGCTGA TGGAGATCGA AGAACCAGCG CGCTTGACCG ACTGGTTGAA CAGGAAAGAC CATCCGACCC AATGGTTCGG CAGTTTGCAA GCTCCGCTTG TCGCTCGAAA AGCCTCCAAC GATTCACAGC CGATCGCCTC TGCAAATTCC CGCATGCCAT TAGAAAATAC ATCGTTAGCG ATTCTGATTG GCCCGGAAGG GGGCTGGACT TCTGAAGAAG AATCGCAATT GATGACCTCT GGTGCGCGCC CTGTGCGACT GGGGCAATTT GTATTGAGGA CAGAGACAGC CGCAATTGCG CTCACATCGC TCGCCCTGAA TGAATTCTCA CTTTAA
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Protein sequence | MSRFFHPELL KPLDSGELLL EGSEAHHALH VLRVKTGQQI VLFDGHGNSA TAEVIRPGRK DVGLRIVSGI QHSSPPALQL TLLVATPKGD RLDWMVEKLT ELGVSRFVPL ITQRSVVDPR ESKLERLRQT VISACKQSHR DWLMEIEEPA RLTDWLNRKD HPTQWFGSLQ APLVARKASN DSQPIASANS RMPLENTSLA ILIGPEGGWT SEEESQLMTS GARPVRLGQF VLRTETAAIA LTSLALNEFS L
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