Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3890 |
Symbol | |
ID | 9140608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 5002316 |
End bp | 5002777 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631901 |
Protein GI | 296124123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.849324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCTG TGACTCGCCG TGAATGGTTG TTTGTGGGTT TTGTCGCTGT GATATCACCT TCAGCCACTG GTTGCGGGAC GATCCTTTAT CCTGAACGCC GGGGGCAGAG GAGTGGCCGG TTTGACTGGG GTGTGGTGGC GCTCAATGCG GTGGGGCTGC TGTTCTTTTT CATACCGGGG GTGATTGCGT TTGCAGTCGA CTTCAGCACA GGGGCGATCT ATCTGCCAGA GGCGGCGAGT GTCCCTGCGC AGTCCTCGCG GAAACGGCAC TTACCAGCCC GTCGTCTGCT GAGCAAACTG TTCCCTAAGA AGGAGATCTC GCGGGCCGAT ATCGAGGAGT TTCTGGCTGA GCAGACCGGG CGCGAGATTC CGCTGATTCC CGGCCAGTAC GAAGCTGAGC CGCTCGAATC GATCGACGAT TTCTGGACAC TCCACGACCT GAAGCAACCT GCCGGCGTGT GA
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Protein sequence | MPSVTRREWL FVGFVAVISP SATGCGTILY PERRGQRSGR FDWGVVALNA VGLLFFFIPG VIAFAVDFST GAIYLPEAAS VPAQSSRKRH LPARRLLSKL FPKKEISRAD IEEFLAEQTG REIPLIPGQY EAEPLESIDD FWTLHDLKQP AGV
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