Gene Plim_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3890 
Symbol 
ID9140608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5002316 
End bp5002777 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631901 
Protein GI296124123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.849324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCTG TGACTCGCCG TGAATGGTTG TTTGTGGGTT TTGTCGCTGT GATATCACCT 
TCAGCCACTG GTTGCGGGAC GATCCTTTAT CCTGAACGCC GGGGGCAGAG GAGTGGCCGG
TTTGACTGGG GTGTGGTGGC GCTCAATGCG GTGGGGCTGC TGTTCTTTTT CATACCGGGG
GTGATTGCGT TTGCAGTCGA CTTCAGCACA GGGGCGATCT ATCTGCCAGA GGCGGCGAGT
GTCCCTGCGC AGTCCTCGCG GAAACGGCAC TTACCAGCCC GTCGTCTGCT GAGCAAACTG
TTCCCTAAGA AGGAGATCTC GCGGGCCGAT ATCGAGGAGT TTCTGGCTGA GCAGACCGGG
CGCGAGATTC CGCTGATTCC CGGCCAGTAC GAAGCTGAGC CGCTCGAATC GATCGACGAT
TTCTGGACAC TCCACGACCT GAAGCAACCT GCCGGCGTGT GA
 
Protein sequence
MPSVTRREWL FVGFVAVISP SATGCGTILY PERRGQRSGR FDWGVVALNA VGLLFFFIPG 
VIAFAVDFST GAIYLPEAAS VPAQSSRKRH LPARRLLSKL FPKKEISRAD IEEFLAEQTG
REIPLIPGQY EAEPLESIDD FWTLHDLKQP AGV