Gene Plim_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3865 
Symbol 
ID9140583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4970615 
End bp4971283 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID 
ProductNADH-quinone oxidoreductase, chain I 
Protein accessionYP_003631876 
Protein GI296124098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC AACTCACACC GATCTCGAAT GACGATGTCG TCTGGATGGA AGAGCCAGAA 
ATGGGATTCT GGGAATCGAC ATTTCTGCCA GCCATTTTCA GTGGCCTCAA GAATTCTTTG 
CGGCATGTGA CCGATTTCAA ACCCGTCACA CAGCAATACC CCGAGGAAAA GCCCGATCTG 
CCACTGAATT ACCGTGGTGT TCATCGCCTG AATCGCGACG ACAAAGGCCG GGTGAAATGC 
GTCGCCTGCA TGATGTGCTC GACCGCCTGT CCTGCACGTT GCATTGAGAT TGTGGCCGAA 
GAAGCTCCCA AAGATGATCC TCTCTGGGCC GACCGCGACA AGCGTCCCAA ATCTTTCGTC 
ATCGACGAAC TCAAGTGCAT TTACTGCGGG ATGTGCGAAG AGGCCTGTCC TGTCGATTCG 
ATCGAATTGA CCCACATCTA CGATCTGACG GGGATGACCC GTCAGGAAAT GAAGTTCAAT 
AAAGAAAAGC TGCTCGAAGT CTTTGATCAA ACCAAAGATA ACCCCCGAGA CCCCATCCGC 
ACTCATCGTG GTATCCTGGG CCCTGCTTCA GACTTCACCT CCTTACCTCA AGTGGGCCCT 
GCCACCCAGA TTCCCCAAGG TGACAAGGCC TCCGAACCCG TATCCACCGA TGTGATTAAG 
CAGGGCTGA
 
Protein sequence
MADQLTPISN DDVVWMEEPE MGFWESTFLP AIFSGLKNSL RHVTDFKPVT QQYPEEKPDL 
PLNYRGVHRL NRDDKGRVKC VACMMCSTAC PARCIEIVAE EAPKDDPLWA DRDKRPKSFV 
IDELKCIYCG MCEEACPVDS IELTHIYDLT GMTRQEMKFN KEKLLEVFDQ TKDNPRDPIR 
THRGILGPAS DFTSLPQVGP ATQIPQGDKA SEPVSTDVIK QG