Gene Plim_3823 details

Gene Information

• Locus tag: Plim_3823
• ID: 9140541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4915311
• End bp: 4917383
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 53%
• Product: diguanylate cyclase
• Protein accession: YP_003631834
• Protein GI: 296124056

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATCTTG TCCGTCGGGC TGAACGTGAT ACGGCTCCCG AACGGGCTGA TGCGAATCTT 
TGTGGCTTAA TCAGTCCTCG TGTTTTTCGC AGTCTGCTGA ACAGCCTTTT GTTCCGTGAC 
CCGGCCACAC TCCGGCATAG CCAGCGTGTG GGTCGACTGG CCACTGGCCT GGCCAAATAT 
CTGGGATGGG AAGACCGCAA TCTCAGAGCC ATTCAGATTG CCGCATTGTT GCACGATCTC 
GGCAAGGTTG GTGTGCCGGA TAGTATTCTT TTCAAGCCGG CTCGTTTGAA CTCTGATGAA 
CTGCGCCTGA TGACGAAAAG TTATCTGATT GGCGTTGATC TTTTGGAAAT GTGCCGGGTT 
GATCCACTGA TTATTCGCAT CATCACCGAT TCCCATCATC GCTATTCGCG TGAACCAGGA 
GCGAATGCCA CATTCAGCGA TATTCATCAG GGGGCACGTA TTCTGGTTGT GGCTGATGCC 
TATGAATCAC TCAGCAATGA TCAGGTCTTT CGCCGGGCGA AAGCTCACGA TGAAATTCTC 
AAGCTGCTCA ATGAGAATGC GGGGACTCAG TTCGATGGGA ACATTGTTTC GGCATTGCAG 
CGCTGGATTC ATACCTATGG GCCGCCGGCG CTTGACGGCA CCATGAATGA TGATGATTCA 
CTGATTCACT ACTATCAGCC TGCCAGCGAT GCGGAGCTTG CTGAAGCTGC CAATCTCAGT 
CATTTATTCA GCTATCTGCA AACTCTCGAT GAACTGTATG ACGGATTCAG TATCATCGAT 
TGCAGTCGTC GTATGCTGGT CTGGAATCGT GGAGCGGTCA AAACTCATCG TCGGCCAGCA 
AGGGAAGTGC TCAATACCAT CTGGAAGCCG CAGGTTTTTG GATATGCCGA CGACCGGGGT 
GTGCCACTGG CTACATCGCA GTGTCCGTTG GAGGCCATCT TTGCCACGGG CAGCAGCTAT 
GCTGCGACCT TGAATATGAC GGATGGAGAA GGAGAGCCAG TGAGTGTCGA ACTCCAGGCT 
TTTCCACTGA TTGATAGAAA TCAGCGGCTG CAGGCTGTGG CAGAAATCTA CCGCCGCACA 
GAACGTGATG AAACCAGTCA CGTTTCACCG GAAGTGCATG CCCTCAAAAT GATGGCCAGT 
CGCGATGCTC TGACGCGAGT CGCGAATCGT GGCGAGCTCG ACAGTCAGAT CGAACAACTA 
TTGAAGAAGT ACAATTCCGA GAGCCAGAAC GAGGTTTTCA GCGTCATATT TGTCGATGCC 
GATCATTTCA AGAGCATTAA CGATAAACAT GGTCACACCG TGGGTGATCA GGTCCTTGTG 
GAACTGGCAC GACTGCTCCA GCACGAGTCG TATTCAGGCG AGATTATTGG TCGCTATGGC 
GGTGAAGAGT TTATTGTGCT CTGTCCTGCG ACAGATGTGG AACTGGCAGT TCGTAAAAGC 
GAACGCTTCC GCATGAGTAT TCAATCGATG CGGTTTGCCG ACTATCCCTC ATTGCGAATC 
ACTGCGTCGT TTGGGGTATC CCAGGTCGTC AATGGGGATA CGGTCGCTTC GCTAGTCGAG 
CGGGCTGATA AAGCGCTCTA TCAGGCGAAG CAGACGGGTC GGAATCGCAC CTGCCATTTA 
ATGACCACAG ATTCCCGTCG GTCGGCCCAT CGCTTTTCGA CCGATGAAGA GGAAGATCCA 
CTGCGATTGA TTCAGCGTTT TTACATAGGG GTGGGGCAAA GCGTGGTCCC CAAGATGGCG 
GGATTTGTCG AAGCTCATCG GGCCAAATTG CTGGTTGTTG AGCCAGGCCG GGTCAAAATG 
CAGTGTGGGC AGGGGACGAT TTTCGGCATG TGGGGTTGGA CGAACAGCAC TCGTCCCGTG 
ATTCTTGAGA TTGTGCTTCC AGAGCTTGTG GAAGAGCAGC GTGGGCATGC GTCGAGGCGT 
GGCCCGAATT CACCAGAGGC GATCTGCGTC ACAATCCAAC CCAAAGGGCG GCCGAACTCG 
CAAGCGATTT TTCAGAATCG TGCCAAACTG TTAATGCAGG ATCTGAAAAG CTACCTCGTC 
CCGTGCGACC GCCAACCGGG TATTGGTGGG TAA 

 

Protein sequence

MNLVRRAERD TAPERADANL CGLISPRVFR SLLNSLLFRD PATLRHSQRV GRLATGLAKY 
LGWEDRNLRA IQIAALLHDL GKVGVPDSIL FKPARLNSDE LRLMTKSYLI GVDLLEMCRV 
DPLIIRIITD SHHRYSREPG ANATFSDIHQ GARILVVADA YESLSNDQVF RRAKAHDEIL 
KLLNENAGTQ FDGNIVSALQ RWIHTYGPPA LDGTMNDDDS LIHYYQPASD AELAEAANLS 
HLFSYLQTLD ELYDGFSIID CSRRMLVWNR GAVKTHRRPA REVLNTIWKP QVFGYADDRG 
VPLATSQCPL EAIFATGSSY AATLNMTDGE GEPVSVELQA FPLIDRNQRL QAVAEIYRRT 
ERDETSHVSP EVHALKMMAS RDALTRVANR GELDSQIEQL LKKYNSESQN EVFSVIFVDA 
DHFKSINDKH GHTVGDQVLV ELARLLQHES YSGEIIGRYG GEEFIVLCPA TDVELAVRKS 
ERFRMSIQSM RFADYPSLRI TASFGVSQVV NGDTVASLVE RADKALYQAK QTGRNRTCHL 
MTTDSRRSAH RFSTDEEEDP LRLIQRFYIG VGQSVVPKMA GFVEAHRAKL LVVEPGRVKM 
QCGQGTIFGM WGWTNSTRPV ILEIVLPELV EEQRGHASRR GPNSPEAICV TIQPKGRPNS 
QAIFQNRAKL LMQDLKSYLV PCDRQPGIGG