| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3819 |
|---|
| Symbol | |
|---|
| ID | 9140537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 4910205 |
|---|
| End bp | 4911593 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003631830 |
|---|
| Protein GI | 296124052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.701414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAC GTGACTTTCT GAGTTCGACC ACAACCGCAG GCCTGCTGGG TTCCACGACA
CTTTGGATCG ATCCGGCTCG AGGAGAGTTG CCCTCATCCT TGCAGGATTC TTCTGCTGTA
CCGAAGAAGA AACGTCGCGT GGCAGCCATT GGTGTGGGCT GGTACGGCAA ATGTGATCTG
TTGCGATTGA TGCAGGTGGA GCCAGTTGAT GTCGTCGCTC TCTGTGATGT CGATTCGCAG
ATGCTGGCGA ATGCCGCCGA GTTGATGACC TCGCGTGGAA AGCTCGAAAA GCCACCGGCA
CTTTACAGTG ATTATCGGCA GTTGCTGGCT GAGGCCAAGC CCGACATTGT GCTGATTGCG
ACGCCGGATC ACTGGCATGC CTTGACGATG ATTGCGGCTG TCGAAGCGGG TGCCGATGTC
TATGTTCAGA AGCCGACGAG TGTCGATATT GCCGAGAGCC AGTCGATGCT GGCGGCTACC
CGGAAGCACG GGCGCGTGGT GCAGGTGGGG ACACAGCGTC GCAGTACGCC TCATATTGCC
GAGGCCAAGC AGAAGTTCAT CGATACGGGC ATGCTGGGAA AAATCGGCCT CGTCGAGGTC
TATTGCTATT ACCACATGCG GGCTAAAGAC AATCCGCCGA TCACAGAGCC GCCACAAAAC
CTCGATTATG AAATGTGGGC AGGCCCGGCA CCCAAACGGC CTTATTCGAC ACTCATTCAT
CCCCGCAGAT GGCGGGCCTT TACCGAGTAT GGCAATGGAA TCATGGGGGA CATGTGCATT
CACATGCTCG ATACTGCCCG GTTTATGCTG GGGTTGGGCT GGCCCCAAGC GGTTTCATCC
GTCGGTGGGA TCTATGTGGA TCGCCAGAGC CAGGCCAACA TTCCCGATAC ACAGACTGCG
ACATTCGATT TCGGCGATCT GGATGTAGTC TGGCAACATC GCAGTTACGG CTCGACACCC
GACCCGAAGT ATCCGTGGGG AGTAACGATT TATGGCGACA AAGGAACTCT CAAAGTCAGC
GTCATGAGCT ACGACTTCAT ACCTCAGGGA AGAGGCGAAG CTGTTCATAA AGATGTCACC
TACGAACTCG AAGAGTATCC CGAAGACAAG ACCGAGAAGG ATCTCGAAAA GCATGTGGCA
CCGGCGATTC GTGCTCACAT GCGGAACTTT CTCAAGGCGA TCGATGAGCG ATCAAAGCCC
ATTGCCGACA TTGAGGAAGG GCATATCTCG ACCGTGAGTT GCCTGCTGGC AAATCTTTCG
CTGGAGTTAG GCCGCACACT CCGTTGGGAT GCAGTGAACG GGCTGGTTGT CGATGATGCC
GAAGCCAACA GCCGCCTGGC CAGGCCTTAT CGTGCGCCAT GGGTGCATCC TGGCGTGAAG
CTGAGTTGA
|
|---|
| Protein sequence | MDRRDFLSST TTAGLLGSTT LWIDPARGEL PSSLQDSSAV PKKKRRVAAI GVGWYGKCDL
LRLMQVEPVD VVALCDVDSQ MLANAAELMT SRGKLEKPPA LYSDYRQLLA EAKPDIVLIA
TPDHWHALTM IAAVEAGADV YVQKPTSVDI AESQSMLAAT RKHGRVVQVG TQRRSTPHIA
EAKQKFIDTG MLGKIGLVEV YCYYHMRAKD NPPITEPPQN LDYEMWAGPA PKRPYSTLIH
PRRWRAFTEY GNGIMGDMCI HMLDTARFML GLGWPQAVSS VGGIYVDRQS QANIPDTQTA
TFDFGDLDVV WQHRSYGSTP DPKYPWGVTI YGDKGTLKVS VMSYDFIPQG RGEAVHKDVT
YELEEYPEDK TEKDLEKHVA PAIRAHMRNF LKAIDERSKP IADIEEGHIS TVSCLLANLS
LELGRTLRWD AVNGLVVDDA EANSRLARPY RAPWVHPGVK LS
|
|---|
| |