Gene Plim_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3806 
Symbol 
ID9140524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4890724 
End bp4891203 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content53% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003631817 
Protein GI296124039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAAGC GCCGTCTGAA TCACACCAGC GTCATTGAAC CGGATATGAC GCCGATGATT 
GATATCGTGT TCCAGTTGCT CACCTTCTTC ATGGTGGTGA TCAACTTCGA GAACACGAAG
GCTGATGAAC GCGTCAAGCT CCCGAAAGAC CTGCTGGCCA AACCGCCCGA AGTCAAGCCG
GCAGAAGAGC TGGTGTTGAA CGTCGGCTTT GATCGTGATC TCTCCGGACG AAAACTTTCC
GAAGAGCCCA TCGTGTTCTA TGCCGGTGAT AAATTCACGA TCAATAACTT CGGTCCGCTC
CTCGAACAGG AAAAACGACT GGCGGAAGCC AAAGGTGGAA AGGGGGCGAT TGACGAAACG
ACAGTCATCC TCCGGGCCGA CAGTGAGGTA CCGACAGGCA AAGTGCAGGA GCTGATTCGC
AAGTGTCAGG AAATTGGCTA CACCAAGTTT TCGCTCAAGG CCATTTCGGA AGAGAAGTGA
 
Protein sequence
MAKRRLNHTS VIEPDMTPMI DIVFQLLTFF MVVINFENTK ADERVKLPKD LLAKPPEVKP 
AEELVLNVGF DRDLSGRKLS EEPIVFYAGD KFTINNFGPL LEQEKRLAEA KGGKGAIDET
TVILRADSEV PTGKVQELIR KCQEIGYTKF SLKAISEEK