| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3801 |
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| Symbol | |
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| ID | 9140519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4883841 |
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| End bp | 4886147 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Thioredoxin domain protein |
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| Protein accession | YP_003631812 |
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| Protein GI | 296124034 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGAG ATTCGACCAT TGCACGCCAT GTTTCGCCCA CGACCGAGTC GTTTGCAGGA
CAGGTTCCCG GCTGGTACGG AGAAATCCCA TCGGCTGATC AACCGGTGCC TGTTGCCGAT
AGCTCCCGTC GGCCTGCGGA GGTGAACTCC CTCCCTGAGA CAAAGCTGAC TCAGGAAGCA
TCGAGAGTTT CCCGCTCAGC CGTAGTCTCT GAATCGGGCG TTGAATCTTC CAATAAGTCA
TCTCTGCATT CTCGATCTCA CGATCAAGTT TCTAAGCCTG CGAAGACACA GGCCCATGCC
TTGCAGATTG CCCTGTCCCA TCGCTCGATC ATTGCTGAAG CGGATGCAAC AGCCGAGGCG
ACAACTCCGG AAGTACCGGT TGCTTCTGCT TTTGAGCCTG AGCTTCCAGC GACAATCCGC
AGTTCTCGAT TTTTCGTTCA CGGCAAACTT TCCCGCACAG CAGGTCTCGC GAGTGCCATG
GCTCTCACGA TGACCTTGCT AGTGGCCGCC GTGGTTGCCA TTGTCTGTCC CACGACATGG
CCGGCTGGTC TGGGGGGTTC GAATCAGACG CTGAAAGCTG CAGGGACACC GGCCAACTCT
GTCGTACTCG ACTTTACCGC TTCCTGGTGC GGGCCCTGTC AGCAGATGAG CCCGATTGTC
TCGAAACTGC AAAGACAAGG TTATGCGATT CGCAAAGTGG ATGTGGATCA GGAACCCAAT
CTCGCCCGTC AGTTTCGCGT TGATTCCATG CCCACATTTA TCCTCGTGAT CGACGGCAAA
GAAGTGAATC GCATTGTCGG CATGACCAAC GAAGCTCAAT TGCGACGGAT GGCTGAGCAG
GCCGTGCAGG GTTCACAACT CGCACGTGGT CAGCAGGAGC GACTGGCAGT TCCAGGTTCA
AAACCACTGC CCAAGACCAA TAGTTCACCA TTCGATGCCG ACGGCGTACC CACCACGGTG
TTGGGTGAAT CATCGCGTCT GGAAGCAGAA ATTGTCTCCA ACCCTCGCAA TGCCCCCGCC
GCTCCCCGCA CTGGAATTCT CAATTCGATT AGCGAAGGCA TGGGCCTGAC CCGATCGGCC
AATCCTTCTA TTCCTGCAGA ACCTAAGCCA CCGGCAGCTC CCGCCAACGA ACTCTTTCGC
GGGAACAATG CAGAAGACGA TGCCGAAATG ACAGTGGCTC ATGTTGATCC CACTTTGGCC
AGTGTGCGTA TTCGAGTTCG CGACAGCCAG GGTGGAATGT CGAACTATGG ATCGGGAACC
ATTGTCGATA GCCAGGCTGG CCGCACGACG ATCATCACCT GCGGGCATAT TTTCCGTGAT
CTGAAATCCA AGCCTGTTGT CGAAGTGGAT GTCTTCCAGG CTCAAGGGAG TCCTCGGACC
TACCTTGGCG AAGTGATGGA TTTCAATCTC GATGCGGATG TGGGTCTGAT CATGATTCCC
ACCGAAAAGG CCGTTTCTTT GGCCCGGCTA TCCCCTGTGG ATGTGAGACT CGGGCCGGGC
GAAGAGATGT TCAGTATTGG CTGCGGTGGA GGCGCCAATC CTTCACGCGA AAGTCACAAG
GTGACAGCCA TCAACCGTTA CAACGGGCCG GAAAACATTG AATGCACAGG AGTGCCGATT
CAGGGTCGCT CCGGTGGCGG GCTGTTCCGA GCCGATGGTC AATTGGCTGG TGTGTGCATT
GCTGCCGATA CGAAAGAACG CCGTGGTCTT TATGCCGGTT TGGAACCCAT CTGCACCATG
CTCGAAAAGC ATCGGCTGGG TGCTCTCGTT CGACGAGAAG GTCGAGGCCG GGCGAATACG
GCTGTCGCCA GTGCCGCCCG CACGGCTGAT GCAGGAAGTT CGTCTGAAGC CATGGGTGAC
ATCCTGATGG CTGGGGGTGG TAACAATCGC GCAGTTTCAG GTGCTGCGGG TAGTAATAAC
AGTGGCACGA ATGCCGCTGC TGAGGCCGCA TTGATGAATC AATCGCCCGA TGCGGAAATC
ATCTGCATTG TGCGTCCACG CGGTGGTGCG GGAGATAACA GTCGGATTGT GGTTCTGAAT
CGTGCCAGCC AGACGTTCAT GACCTATCTG ATGGGAGAGG TTGACTCTCA GTCGCAGCGT
CTGCCGGTTT CACTCCGAGT GGACGACAAC CAGCGGCAGA CAGCTTCGTC GGTGTCTGAA
AAATCAGTGG CCGCCGTTGA ACCTGCCAGA GAGCCTGCTC GTGAAGCTCT CGGGCCGAGA
CCGTGGGTTT CGAGCAATTC GACCGCCTTC AAGCGACAGG TTTTGCCGCG AAGGGAAGAA
CTTGTGCCTC TGACAGAACG GAAATAG
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| Protein sequence | MDRDSTIARH VSPTTESFAG QVPGWYGEIP SADQPVPVAD SSRRPAEVNS LPETKLTQEA
SRVSRSAVVS ESGVESSNKS SLHSRSHDQV SKPAKTQAHA LQIALSHRSI IAEADATAEA
TTPEVPVASA FEPELPATIR SSRFFVHGKL SRTAGLASAM ALTMTLLVAA VVAIVCPTTW
PAGLGGSNQT LKAAGTPANS VVLDFTASWC GPCQQMSPIV SKLQRQGYAI RKVDVDQEPN
LARQFRVDSM PTFILVIDGK EVNRIVGMTN EAQLRRMAEQ AVQGSQLARG QQERLAVPGS
KPLPKTNSSP FDADGVPTTV LGESSRLEAE IVSNPRNAPA APRTGILNSI SEGMGLTRSA
NPSIPAEPKP PAAPANELFR GNNAEDDAEM TVAHVDPTLA SVRIRVRDSQ GGMSNYGSGT
IVDSQAGRTT IITCGHIFRD LKSKPVVEVD VFQAQGSPRT YLGEVMDFNL DADVGLIMIP
TEKAVSLARL SPVDVRLGPG EEMFSIGCGG GANPSRESHK VTAINRYNGP ENIECTGVPI
QGRSGGGLFR ADGQLAGVCI AADTKERRGL YAGLEPICTM LEKHRLGALV RREGRGRANT
AVASAARTAD AGSSSEAMGD ILMAGGGNNR AVSGAAGSNN SGTNAAAEAA LMNQSPDAEI
ICIVRPRGGA GDNSRIVVLN RASQTFMTYL MGEVDSQSQR LPVSLRVDDN QRQTASSVSE
KSVAAVEPAR EPAREALGPR PWVSSNSTAF KRQVLPRREE LVPLTERK
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