Gene Plim_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3794 
Symbol 
ID9140512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4874813 
End bp4875964 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content56% 
IMG OID 
ProductCysteine desulfurase 
Protein accessionYP_003631805 
Protein GI296124027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.567402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATC TCGACCATAA TGCCACGACG AAACCACTCC CTGAGGTGGT TGAAGTGGTT 
TCGAACTGTC AGCAGGAAGC CTGGGCCAAT CCGGGTTCGC GCCATGCCAT GGGCCGACGT
GCCAGACGAG TTCTGGATGA CAGTCGGGAA TCGATTTCGA GCCTGCTCGG CGCCGCTCCT
GAGGAATTGA TCTTCACATC AGGAGGAACG GAATCAATCA ATCTGGCGCT GCGAGGTCTC
GTGGGAACCC GGCCCGGCGT CATTGTGATG GGCTCGGGAG AACATCCTGC CACCGTAGAA
ACCTGCCGCT GGCTGGCCAT GGTGCAAGGT CACAAGCTGC TCGAAATTCC TGTCAATTCT
CAAGGTGAGT TGAGAACACC CGACCAGTGC GAGATTCCCT GGGATGATGT CCGACTGGTG
ACGATTCTCT GGGGGCATAA TGAAACTGGT GTGATTCAAC CGATTGATCC ATGGAGCCAT
GCCTGCCGCG ATCGAAACAT TCCATTGCAT CTAGATGCCG TGCAGATGAT TGGCAAAATG
CCACTGGAAG AGGTGTCGTT TCGAAAGACC GGTGCGACCG CCATCAGTTT TGCCAGTCAT
AAGTTTCATG GCCCGCGCGG AATTGGGGGT TTGCTCCTTT CGCCAGCAGC GCGGTTAACA
CCACTGCTCA CGGGCGGGCA CCAGGAACGA GATCGCCGGG CGGGGACAGA GTTCACACCA
CTGGTTGCGG GAATGGCGAA AGCCCTGGAA TTGTTTGCCC GGGAAGGAAG TTCCGCATAT
CAGCGCATGA TCGAGTTGAG GAAACTGCTG GAGGATCATC TTCTCGATAG TTCTGCCCCG
GCTCATGTGT TTGGAATCGA GGCTTCAAGC CGCCTGCCCA ATACCATTCA AGTTGCCTTC
GAAAATGTGC CAGCAGAGGC TTTGCTGGTG AATCTCGATC TGGCTGGTAT CGCCTGTTCG
GCTGGCAGCA CCTGTGCCAG TGGTTCGATG GAGCCTTCCC CCATCCTGCT GGCCATGGGG
GTGCAGCCAG AGCTTGCCAA GTGCTCGATT CGATTGAGCC TCGGGCGATT CACCACGCGC
GAGGAAATCA TGAGTGCGGT TTCCATCATT GCCCGCACTG TGCAGCGCTT ACGGGATCAG
GCTGCTCAAT AG
 
Protein sequence
MIYLDHNATT KPLPEVVEVV SNCQQEAWAN PGSRHAMGRR ARRVLDDSRE SISSLLGAAP 
EELIFTSGGT ESINLALRGL VGTRPGVIVM GSGEHPATVE TCRWLAMVQG HKLLEIPVNS
QGELRTPDQC EIPWDDVRLV TILWGHNETG VIQPIDPWSH ACRDRNIPLH LDAVQMIGKM
PLEEVSFRKT GATAISFASH KFHGPRGIGG LLLSPAARLT PLLTGGHQER DRRAGTEFTP
LVAGMAKALE LFAREGSSAY QRMIELRKLL EDHLLDSSAP AHVFGIEASS RLPNTIQVAF
ENVPAEALLV NLDLAGIACS AGSTCASGSM EPSPILLAMG VQPELAKCSI RLSLGRFTTR
EEIMSAVSII ARTVQRLRDQ AAQ