Gene Plim_3793 details

Gene Information

• Locus tag: Plim_3793
• ID: 9140511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4874079
• End bp: 4874810
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 56%
• Product: demethylmenaquinone methyltransferase-like protein
• Protein accession: YP_003631804
• Protein GI: 296124026

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGTAG TCATCTCGCC GCAAACCCTC ACGGAACTGG CACTCTTCGA TACTCCCACG 
ATCTGCAATG CGGTCGAGCT TTGGGATCTC CGGCCTCGTA ATGAAGGCTA CATGAATTCG 
TCCATCCGGG CCTGCTTTCC GGATCTTCCA CCGATGGTCG GCTTTGCTCT CACCAGCACC 
TTCCGCAGCC AGAAGCCACC CCGTGGCGGA GATGCTTACG GCAGCATGGG TGCACAAGTT 
GAAGCCATGG CCAGTATTCC CGGCCCGCCC GTGATCGTTT TTCAGGATCT GGATGAGCCC 
GTCGCTTCGG CCACATTCGG CGAAGTGATG TGTACGACCT ATCAAAGTTT TGGTGCCAAA 
GGCATCATCA CCTCTGGTGC CGGTCGCGAC CTCGATCAGG TCGCTCCCCT CAAGTTTCCC 
GCTTTTACCA GTGGCTCCAT CGCTGCCCAT GGGTATTGCC ATATCCTCGC GATCAACGTC 
CCTGTCACAG TGGGTGGCAT CACCATCTAT CCCGGCGATC TGCTTCATGG CGACCGCAAT 
GGAGTGAGTA CCATACCGCC GGAAATCGCG AGCGAAGTTC CCGATGTCTG CCGTGAACTT 
GCGAAAGCCG AAGCCATTGT CCTCGGTTAC CTCAAAGATC CATCTCGAAC AGTCGCAGGC 
TTTAACGATG CTCGCAAAGC CTGTGCGGCT CATATTGCTG AGGTCAGGTC ACGATTGCTT 
AAAACTCATT AA 

 

Protein sequence

MSVVISPQTL TELALFDTPT ICNAVELWDL RPRNEGYMNS SIRACFPDLP PMVGFALTST 
FRSQKPPRGG DAYGSMGAQV EAMASIPGPP VIVFQDLDEP VASATFGEVM CTTYQSFGAK 
GIITSGAGRD LDQVAPLKFP AFTSGSIAAH GYCHILAINV PVTVGGITIY PGDLLHGDRN 
GVSTIPPEIA SEVPDVCREL AKAEAIVLGY LKDPSRTVAG FNDARKACAA HIAEVRSRLL 
KTH