Gene Plim_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3749 
Symbol 
ID9140467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4822398 
End bp4823330 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content55% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003631760 
Protein GI296123982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAG ATGTCGCCTC TCCGACAGCG GCTAAAGATT CATCCTCCCT GTCTTCCGGG 
AATGAACCCG TCATTTCGAT TCGAAACCTG TCGAAAGACT ATCGGGATTT CTGGGGTCGC
CCCAAGGTGA AGGCGCTCAA ATCGCTCACC ATGGAAGTTC GCAAAGGCGA AGTTTTCGGC
CTCCTCGGCC CCAATGGTTC CGGCAAAACC ACCACCATGA AGCTGCTGCT CGGTCTGCTC
TTCCCGACAG AAGGCGAAAT CTCCATCCTC GGCAAACCCG CGACCGATGT CTCCAAAAAT
GAACGCATTG GTTACCTGCC CGAAGAGTCG TATCTTTACC GTTTCCTCAA TGCTGAAGAA
ACCCTCGATT TTTACGGCCG CCTTTTCCGT CTCCCCGCCG ATGTTCGCAA GCAGCGCACC
AACGAACTTC TCGAACTCGT CAAAGTCTCT CATGCCCGCA AGCGGCAACT CAAAGAGTAC
TCCAAAGGGA TGACTCGACG TATCGGTCTG GCTCAAGCTC TGATCAACGA TCCCGAACTG
ATTCTTCTCG ATGAACCCAC CAGCGGTCTC GATCCTCTGG GGAACCGGGA TATGAAAGAC
CTCATCCTCA AGCTCAAAGA GCAGGGCAAA ACCATCGTCA TGTGCAGCCA CCTCCTTGCC
GACGTGCAGG ACGTCTGCGA CCGGATCGCG ATTCTCTACG GCGGCGAACT GAAGGTGATG
GGCCGGGTCG ATGAACTGGT CAAAGAACAG GATGCCACGC AGATCCGTTC AAGCAAGCTG
TCCGAAGCCG CTGCCAAAGA AGTGCTTGAT GTCCTCAAGA AACATGGCGT CTCCGACGTG
CAGATCGATC AACCCACATC GTCGCTGGAA GACCTCTTCC TGCGGACCGT TCAGGAAAGC
CGCGAACGTC CTGGTCGCCG CATTTCGGTC TAG
 
Protein sequence
MSTDVASPTA AKDSSSLSSG NEPVISIRNL SKDYRDFWGR PKVKALKSLT MEVRKGEVFG 
LLGPNGSGKT TTMKLLLGLL FPTEGEISIL GKPATDVSKN ERIGYLPEES YLYRFLNAEE
TLDFYGRLFR LPADVRKQRT NELLELVKVS HARKRQLKEY SKGMTRRIGL AQALINDPEL
ILLDEPTSGL DPLGNRDMKD LILKLKEQGK TIVMCSHLLA DVQDVCDRIA ILYGGELKVM
GRVDELVKEQ DATQIRSSKL SEAAAKEVLD VLKKHGVSDV QIDQPTSSLE DLFLRTVQES
RERPGRRISV