| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3748 |
|---|
| Symbol | |
|---|
| ID | 9140466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 4820163 |
|---|
| End bp | 4821968 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_003631759 |
|---|
| Protein GI | 296123981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATGG AAACGCCGAG TACTTTGGAA AATTCCCAGG TCTTGAATCC TTCAGGGCGA
AAGTCGCCTC ATTCCACGTC AATCATAGCG GGGATGACTG CTGATCTCGT CTCGGGATTT
CTCGTCTTTC TCATTGCCTT GCCATTGTGT CTGGCCATCT CCAAGGCCAG CAATTTCCCG
CCGATTGCCG GTATCTGGAC AGCCGTTATT GGTGGAATTG TCTGTACCTT CATAAGCAAT
TCTCAGTTGA CTATCAAAGG GCCTGCTGCC GGTCTGATTG TGATTGTCGC TGGTGCTGTT
ATGGAACTGA GCGCTGCTTT TGGTGGAGAC ACAACGACAG CCGAAGGGAT GCTGCTGGGT
TATCGCCTGA CTTTGGGAAT CGGATTCGCT GCCGGCCTCC TCCAGGTGCT GATTGGTCTC
CTGAAACTCG GGAAAATCTC CGATTTATTC CCCTCCACCC CAGTGCATGG CATGCTGGTG
TCAATTGGTT TGATTGTCAT TGCCAAACAG GCTTATGGTC TCCTGGGAAC TGATGCACCC
CTGGGCCATG GGCACGAGCC AGCTTCTCCC TTGGTATTGC TCGCCAGCCT CCCCGCAGCC
ATTCTGCAAT CCAATCCGGA AATCTTTCTG ATTGGCGCTG TCAGCCTGCT GATCATGTTC
ACCCTGCCCA TCATCGGACA TTATTGGAAG CTCTTCCGCC TGGTCCCTGC ACAACTGGTT
GTGATTGTGG TCTCAATTGG TATGGGTCTG TGGTTCGATC TCGAACACGA GCACAAATAT
CTGTTTCCCA TTGGTGCCTT CTCCTCAGAA ACAGCCATCG AGTACGTCGT CGGCCCCAAG
TTTCTCGTAA CGATTCCGGA TGTGCTGAGC GATCCACTCG CAGCGATTAC CTTCCCCGAT
TTTCGCAGTC TTTCAAGCTG GGTTGGTCTG AAGTATCTGT TGCTCTTCAC GCTGATTGGC
AGCCTTGAAT CGATCCTGAG TGCCAAAGCC GTCGACCTGC TCGATCCCGA AAAACGCAAA
ACGAATTACG ACCGCGATCT GCTGGCCGTG GGAGTGGCGA ACTCCATCGC TGCTGCGATC
GGCGGACTCC CCATGATTTC CGAAATCGTG CGGTCATCGG CCAATATCGC GAGTGGTGCC
AAAAGCCGGT TCGCAAATCT CTGGCACGGA TTGTTCTTAT TCGCATTCGT GCTCCTTTTT
CCGGGTCTGA TTCACAGTAT TCCACTGGCA GCACTGGCAG CCATGCTGGT TTACACCGGT
TTTCGCCTCG CTTCGCCAGC CACATTTGTG CGTACTTATC GCGTGGGGAG TGAGCAACTG
GCCATCTTCA TGGTCACGAT TGTCACGACG CTGGCCACTG ACCTCTTGAT TGGCATTGTG
ACCGGTGTGG GCTGCAAGCT GATGATCAAT CTCTGGCACA GCCGGTCACC CCGCAGCATG
CTGACACCAC AGCTTTCGAT CGAAGCTGAG ACGGAATCTG CGGTCACACT CGAAATGAGT
GGGGCTGTCG TCTTCAGCAA CTGGCCCCGG CTCCAGAAGA CCATCGAAGA GCAGCTTACC
CTGCGAGAGC GAGTCATCCT CGATCTCACA GAAACGACTT TTGTCGATCA TACCGTCATG
GAAAAACTCC ACGAACTCGA AACCCACTGC CGGAGCAGCA ATCGCACCTT CGAGGTGGTC
GGCCTCGATG ACCATACACC GTTTTCCCTG CATCCGCTGG CCGGCCGAAA AAAACCCGCT
TCCACCTCCA AAGCATCCCT TCCGCAGGAA ACCGCACCGT CAGTCGTTCC TTCCGACTCG
GTTTAA
|
|---|
| Protein sequence | MQMETPSTLE NSQVLNPSGR KSPHSTSIIA GMTADLVSGF LVFLIALPLC LAISKASNFP
PIAGIWTAVI GGIVCTFISN SQLTIKGPAA GLIVIVAGAV MELSAAFGGD TTTAEGMLLG
YRLTLGIGFA AGLLQVLIGL LKLGKISDLF PSTPVHGMLV SIGLIVIAKQ AYGLLGTDAP
LGHGHEPASP LVLLASLPAA ILQSNPEIFL IGAVSLLIMF TLPIIGHYWK LFRLVPAQLV
VIVVSIGMGL WFDLEHEHKY LFPIGAFSSE TAIEYVVGPK FLVTIPDVLS DPLAAITFPD
FRSLSSWVGL KYLLLFTLIG SLESILSAKA VDLLDPEKRK TNYDRDLLAV GVANSIAAAI
GGLPMISEIV RSSANIASGA KSRFANLWHG LFLFAFVLLF PGLIHSIPLA ALAAMLVYTG
FRLASPATFV RTYRVGSEQL AIFMVTIVTT LATDLLIGIV TGVGCKLMIN LWHSRSPRSM
LTPQLSIEAE TESAVTLEMS GAVVFSNWPR LQKTIEEQLT LRERVILDLT ETTFVDHTVM
EKLHELETHC RSSNRTFEVV GLDDHTPFSL HPLAGRKKPA STSKASLPQE TAPSVVPSDS
V
|
|---|
| |