Gene Plim_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3724 
Symbol 
ID9140442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4785973 
End bp4786974 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003631735 
Protein GI296123957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGCC GTGGATTCAC TCTGATTGAA TTGCTGGTGG TGATTGCGAT CATCGCCATT 
TTGATTGCCC TGTTGTTGCC TGCCGTGCAA CAGGCACGCG AAGCCGCACG ACGAACCCAG
TGCCGCAACA ATCTGAAGCA GATGGGTTTG GCGCTGCATA ACTATCATGA TGTTGCAGGC
GTCTTTCCGA TGGGGACGCG CGGCGGTGAC ATCTACGTTC AGGCGGGTGT GAAGAATGGC
ACGAACTGGC GGGTCGCCCT TTTGCCCTAC ATGGATCAGG CTCCTTTGTT CAACAGCCTG
AACTTCTCGA CGGGAAACTT TTCCGCAGGA ACCGACCCTG CTCTGGCGTA CTCGGGTGGC
AATGAGCGTT TGAGGAATTT TGTGTTCTCA GGCTACTTGT GCCCTTCGAG TTCGCTGGAG
ACGTTCCCTC AGACTTACAC CAGTAACAGC GGTGCCTCCC AGACGTTCAA CAATCAGGGG
AACGGCATGG GGATTCAGTA TGTCGGGATC ATGGGTGCCG CCCCGAACTT TGCCTGGACA
CCTGCGACGA CTGGTCATCG CGATTGTGGA CAAGGTTGGA GCTGCAATCA GGGGATGCTG
CGAATGAATC AGGCCACGGG GATTCGTAAT GCGACCGACG GAACCAGCAA CACCATCGTC
ATTGCGGAAC AATCGGGCTT TACTGGTGGA TCGAACCGGA CATCCAATTA TTTTGGCGGG
TGGTTCGGTG CACGCAATCA GTTGACTATC ACCGACACGA CCTGCACGGA TCACTGGCAG
ACTGGCACAA CCTGTGTCCG TCATCCGCCG AATTCGAGAA TCTTCGACGC GGGAAACGAC
TTGATCTACC GCAATAACAC CATGCTGACT TCGTTCCACA CAGGTGGTGT GCATGTGCTG
CTGGGAGATG GTGCGGTTCG ATTTGTTTCG GACAATATCG ATTTTCAGAT GCTCAAAATG
CTCTGCATCC GCGATGACGG ACAGGTGGTT GGTGAGTTTT AG
 
Protein sequence
MSRRGFTLIE LLVVIAIIAI LIALLLPAVQ QAREAARRTQ CRNNLKQMGL ALHNYHDVAG 
VFPMGTRGGD IYVQAGVKNG TNWRVALLPY MDQAPLFNSL NFSTGNFSAG TDPALAYSGG
NERLRNFVFS GYLCPSSSLE TFPQTYTSNS GASQTFNNQG NGMGIQYVGI MGAAPNFAWT
PATTGHRDCG QGWSCNQGML RMNQATGIRN ATDGTSNTIV IAEQSGFTGG SNRTSNYFGG
WFGARNQLTI TDTTCTDHWQ TGTTCVRHPP NSRIFDAGND LIYRNNTMLT SFHTGGVHVL
LGDGAVRFVS DNIDFQMLKM LCIRDDGQVV GEF