| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3720 |
|---|
| Symbol | |
|---|
| ID | 9140438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 4783172 |
|---|
| End bp | 4784464 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1501 |
|---|
| Protein accession | YP_003631731 |
|---|
| Protein GI | 296123953 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCAG TCATTCACGA TCTTGTTCAG CTTTCGAGAA ACCACTTTAC CCGCCGACGT
CTGCTGCAAT CTACTGCGGC TGGGATGGGT GCGATGGCTG CCGGTGGTTT GCTGCCAGCT
TGTCTGTCGG CTCAGGCGGC TGATCTGCAG CAGAAGAAGC GTTCGATCAT TGTCCTCTGG
ATGCAGGGAG CACCCAGCCA GTTCGAGACC TTCGATCCCA AGCCTGGTAC GGAAACAGGC
GGCCCTACGA AGTCCATCTC GACAGCCGCC CCGGGAATTC AGATTGCCTC GACCTTCCCG
CAAGTTGCGA AAATGATGAA CGAGATTGCC CTGATCCGTT CACTCACGAA TAAAGAAGGG
AATCATCAGC GGGCGACTTA CCAGTTGCAT ACAGGCTACA TTCCCACCGG TTCGGTCAAG
CATCCTTCAC TGGGGGCGAA TATCTCCCGA CAGATTGCTC CTGCCGGGCA GGATCTGCCG
TCGCTGGTCA CCATCGGGAA TGCGATAGCC GGGATTGGTG CTGGGTATCT GGGAATCAAC
TACGAGCCGC TGCACCTCAA TCAGGCCGGT AAGATTCCCG ATAACGTCAC GATTGGAACG
AGTACCGAAC GCTTTGACCG ACGGCTGGGT CTACTCGGCC AGATGGATCA GCAGTTTGCC
GAACGTGGTG GAGCCTCTGT CGTGCAGACA CATCGCGATC TCTACTCAAA GGCATCAGGG
ATGGCTCAGT CGAAGGATCT GAAGGTCTTC GACCTCGATG AAGAACCAGC CGCTCTCAAG
GAGGCTTATG GCGATACCAA CTTTGGGCGT GGTTGCCTTC TGGCGCGCCG TCTTGTTGAA
GCAGGTGTCA CTTATATCGA AGTGCGCGTG GGGAACTGGG ATACCCATGC CGATAACTTT
GATGCGACGA CCCGGCTGGC TGGGGAAGTT GATCCGGCGG CAGCCACTTT GATTCGAGAC
CTCAAAGACC GTGGCCTGCT CGATTCGACA CTCGTGGTCT GGATGGGTGA GTTTGGCCGC
ACTCCCAAAA TCAATGCCCG CACAGGTCGC GATCACTTCC CGAAAGCATT TAACGGCTTC
CTCGCGGGAG CCGGTATTCG CGGTGGTCAG GTGATTGGAC GCACCAACGC CGAGGGGACA
GAGATCGAAG ACCGACCAGT GACTGTGGGT GATCTCTTCA CATCGATCTG TGCGGCTATG
AAGGTCAATC CCAAGGATGA AACCATGAGC CCCCAGGGCC GACCTCTCAA GGTCATTGAA
TCGGGCGAAG TGATTCAAGG ACTCTTCGCC TGA
|
|---|
| Protein sequence | MSPVIHDLVQ LSRNHFTRRR LLQSTAAGMG AMAAGGLLPA CLSAQAADLQ QKKRSIIVLW
MQGAPSQFET FDPKPGTETG GPTKSISTAA PGIQIASTFP QVAKMMNEIA LIRSLTNKEG
NHQRATYQLH TGYIPTGSVK HPSLGANISR QIAPAGQDLP SLVTIGNAIA GIGAGYLGIN
YEPLHLNQAG KIPDNVTIGT STERFDRRLG LLGQMDQQFA ERGGASVVQT HRDLYSKASG
MAQSKDLKVF DLDEEPAALK EAYGDTNFGR GCLLARRLVE AGVTYIEVRV GNWDTHADNF
DATTRLAGEV DPAAATLIRD LKDRGLLDST LVVWMGEFGR TPKINARTGR DHFPKAFNGF
LAGAGIRGGQ VIGRTNAEGT EIEDRPVTVG DLFTSICAAM KVNPKDETMS PQGRPLKVIE
SGEVIQGLFA
|
|---|
| |