| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3680 |
|---|
| Symbol | |
|---|
| ID | 9140398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4732789 |
|---|
| End bp | 4733757 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | dihydrouridine synthase DuS |
|---|
| Protein accession | YP_003631691 |
|---|
| Protein GI | 296123913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTG GGAATATCAG TCTGGCTCAT GGGCTGACAT TAGCTCCGAT GGAGGAGCAT
ACGAGTTTGC CTTTCCGGCT GATTTGCAAG CAGCAGGGAG CCAGCCTGGT TTGCAGTGAG
CGGATCGATG CCAAAGATGT GGCCGAGCGG GATAAGCGCG CGATCAAGCT GCTCTCGACG
ACTTCGGCGG AGCGGCCGGC TGTCGGGCAG ATCAGCGGGA ATGATGCTGC TCAGATTGGT
GAAGCCGCCC GGGTCATTGA AGAACTCGGT TTTTCAATGG TCGATCTCAA TTTTGAGTGC
CCGATCCGTC GTCTGGTGGG TCGTGGCGAA GGTGGTGCGC TGATGGGGCA GCCACAGCGG
ATTGCCGAGC TGGTGGCGGC AGCTAAGCAG GCGGTCTCGA TCCCGGTGAC AGTCAAATTG
CGGACAGGCC CTAAAGCGGG CGAAGACACC GCTGTCGAAA CAGCCCAGCG AGTCGAGCAG
GCTGGCGGTG CGGCCATAAT TCTGCATGCC CGCAGTGTCG AGCAGGCTTA TCTGGGTGGG
CCGGACTGGC AGCATGTGAC GCGTGTGAAG GAAGCGGTTT CGATTCCGGT GTTAGGAAGT
GGTGGAGTGC GTACGCCTCA GGATGCCATC AGTTTTCTGG AATCGAGTGG AGCCGATGGC
GTGGCGATTG GCCGGGGTTG CCTGGGGAAC CCGTGGATCT TTCAGCAGGC CCGTACGCTG
CTGTTTGGCA GTCGTGAGAT TATTGAGCCG AGTCCTGCCG AGCGAGGGAA AGTACTGCTG
GCTCTGGTCG AGCATGAGTT CGAGTTTTAT TCAGCTCATC TGGCCCAGAA GCGACTGGCC
CGGACGGCTT GCTACTTTGC GAAGTTCCTC CCGGATTTTG CGGAGTTCAA GAAGGAGATC
CACGCCATCA AGAATCTTGC TCAGTTTCGC ACACTGGTGC GGGAATGGTT CCGGCCAGTG
GCTCGGTAG
|
|---|
| Protein sequence | MRIGNISLAH GLTLAPMEEH TSLPFRLICK QQGASLVCSE RIDAKDVAER DKRAIKLLST
TSAERPAVGQ ISGNDAAQIG EAARVIEELG FSMVDLNFEC PIRRLVGRGE GGALMGQPQR
IAELVAAAKQ AVSIPVTVKL RTGPKAGEDT AVETAQRVEQ AGGAAIILHA RSVEQAYLGG
PDWQHVTRVK EAVSIPVLGS GGVRTPQDAI SFLESSGADG VAIGRGCLGN PWIFQQARTL
LFGSREIIEP SPAERGKVLL ALVEHEFEFY SAHLAQKRLA RTACYFAKFL PDFAEFKKEI
HAIKNLAQFR TLVREWFRPV AR
|
|---|
| |