| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3623 |
|---|
| Symbol | |
|---|
| ID | 9140341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 4659086 |
|---|
| End bp | 4660483 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF162 |
|---|
| Protein accession | YP_003631634 |
|---|
| Protein GI | 296123856 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTG CCAAGCACGA TCACCCGACC AACGCCCAGA AGTTCACCGA TAATGAGCCG
CGTGCCCACT GGCACGATCA GGCAATCTGG TTTGTGCGCT CCAAGCGGGA TAAAGCCGCC
TGGACATTGC CGGAATGGGA GCTGCTGCGT GAGCGGGCTT CACAAATCAA AACACACATG
CTCTCGAACC TTGCGGGATA TCTCGAACAG TTCGAAGCCG AAGCCACCAA ACGTGGAGCC
GTCGTCCATT GGGCCAAGGA TGCCGCCGAG CATAACGAGA TCGTCTTAAG CCTCTTGCAG
AAGCACGGCG TCAAAAAAGT CGTGAAAAGC AAATCGATGC TCACGGAAGA GTGCCATCTC
AATCCGTTTC TCGAGCGGCA TGGCCTCGAA GTGGTTGATA CCGATCTGGG GGAATGGATT
GTCCAGCTTC TGCATGAACC ACCCAGCCAT ATCGTCATGC CCGCCATTCA CATCAAGCGG
GAAGAAGTGG GCGAGCTGTT CCATGAACAT CTGGGAACGG AAAAGGGAGC CACCGATCCT
CCTTACCTTG TGAATGCTGC TCGTGTCGAA TTGCGGCAGA AGTTCCTCGG TGCGGAAGCC
GGCATCACAG GGGTGAACTT CGCAATTGCC GAGACAGGCG GCTTTGTCGT CTGCACGAAT
GAAGGGAACT GCGATTTAGG AGTTTCGCTG CCGAAATTGC ATATTGCCTG CATGGGGATG
GAAAAGATCA TTCCGAGGGC CGCCGATCTG TCGGTCTTCC TCCGTTTGCT GGCACGCTCA
GCGACCGGGC AGCCGATCAC GACTTACTCG TCTCATTTCC ATGGCCCGAT GGAAGGTGGC
GAACTGCATA TTGTGATCGT CGATAATGGC CGCAGCAAAA TTCTCGGGAC GCCCGAGTTT
CGCAGGTCTC TGCACTGCAT TCGCTGTGGT GCCTGCATGA ATACCTGCCC GGTCTATCGC
CGCAGTGGCG GGCACAGCTA CGAAACGACT GTCCCCGGCC CGATTGGCTC GATCCTCGCC
CCATCGCGCG ACCCGGCTCA ACACAGCACG TTACCATTTG CCTGCAGCTT GTGCGGCTCA
TGCAGTGATG TCTGCCCTGT GAAGATCGAT CTGCATCTGC AGCTCCTCAC CTGGCGAAAG
CAGATTGCCG CCCTGGGGCT TCTCCCCTTT GACAAACGCT GGGGCATGTG GTTTGCCGGC
AAGCTCTTCA GCCACCCCAG GCTGTATGAG TTCATGGGGA AAGTCGGCCG AAAGCTCTGG
CCCTGGCTCC CCAGATTCAT GGTCTACAAC GGCCTCAACA AGTGGGGCAA ACAACGCGAA
CTCCCCCCGA TGCCAAAGAA GTCTTTCCGG GAATTGTATG CGGAGAGACA GAAGATCGCC
GAGAAATCTA AGAACTAA
|
|---|
| Protein sequence | MIAAKHDHPT NAQKFTDNEP RAHWHDQAIW FVRSKRDKAA WTLPEWELLR ERASQIKTHM
LSNLAGYLEQ FEAEATKRGA VVHWAKDAAE HNEIVLSLLQ KHGVKKVVKS KSMLTEECHL
NPFLERHGLE VVDTDLGEWI VQLLHEPPSH IVMPAIHIKR EEVGELFHEH LGTEKGATDP
PYLVNAARVE LRQKFLGAEA GITGVNFAIA ETGGFVVCTN EGNCDLGVSL PKLHIACMGM
EKIIPRAADL SVFLRLLARS ATGQPITTYS SHFHGPMEGG ELHIVIVDNG RSKILGTPEF
RRSLHCIRCG ACMNTCPVYR RSGGHSYETT VPGPIGSILA PSRDPAQHST LPFACSLCGS
CSDVCPVKID LHLQLLTWRK QIAALGLLPF DKRWGMWFAG KLFSHPRLYE FMGKVGRKLW
PWLPRFMVYN GLNKWGKQRE LPPMPKKSFR ELYAERQKIA EKSKN
|
|---|
| |