| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3582 |
|---|
| Symbol | |
|---|
| ID | 9140300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4611404 |
|---|
| End bp | 4612432 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_003631594 |
|---|
| Protein GI | 296123816 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACCA TGCATGTTCT CGTTACCGGT GGTTGTGGAT TCATTGGTTC AGCCCTTGTC
CGTCATCTGG TGAGGAACAC CGATTGGACA GTGGTGAATG TCGATTGTCT CACTTATGCG
GGGCATGTTG AATCTTTGGA AGAAGTAGCG ACCCATCCGC GACATCTCCT GATCCAGAAG
CATATTGCTG ACCGGGAAGC GATGGATGCG GCTTTTGCGA AGTATCAGCC AGCCGCTGTG
ATGCATCTGG CAGCTGAGAG CCATGTGGAT CGATCGTTGA CCGGGCCGGC AGAGTTCATC
AACACCAACA TTGTGGGAAC CTACACATTG CTGGAAGCGG CCCGCACGCA TTACGGGAAG
CTCGCGGCCA GCGACAAAGC GAAGTTCCGC TTTCTGCACG TTTCGACGGA TGAAGTGTTT
GGTGCGCTGG GGGCTACCGG CCAGTTTACC GAAGAGACCC GCTACGACCC GCATTCCCCT
TATTCGGCCA GCAAGGCCTC TGCCGATCAT CTGGCGCGGG CCTGGAATCA TTCGTATGGG
TTGCCAGTGC TGGTCACCAA CTGCAGCAAC AACTACGGGC CCTTCCAGTT TCCTGAAAAG
CTGATTCCGG TCGTCATTCG CAAAGCGCTG GCCGAAGAGC CGATCCCTGT TTATGCCAAG
GGAGAGAACG TGCGCGACTG GCTGCATGTC CAGGATCATG TTTCGGCTCT GCTGCGAGTT
CTCGAAACCG GCATGATTGG GGAAACGTAT GCGATTGGTG GCCGGGCGGA AGTTCGCAAC
ATCGACCTGG TCCATGTGAT CTGCAAAGTG CTGGATGAGT TGCGCCCCAG GCCACAAGGT
GGCCGGCATG CCGACCTGAT TACGTTTGTC TCCGATCGTC CCGGTCACGA CTTCCGCTAT
GCGATTGATT GTTCGAAGAT CGAGCGGGAA CTGGGTTGGA AACAATCGGT CACATTCGAG
CAGGGGATGC GGGCGACAGT CGAGTGGTAT CTGGGCAATC AGGCCTGGGT GAACGCTGTA
CTGAAGTAG
|
|---|
| Protein sequence | MLTMHVLVTG GCGFIGSALV RHLVRNTDWT VVNVDCLTYA GHVESLEEVA THPRHLLIQK
HIADREAMDA AFAKYQPAAV MHLAAESHVD RSLTGPAEFI NTNIVGTYTL LEAARTHYGK
LAASDKAKFR FLHVSTDEVF GALGATGQFT EETRYDPHSP YSASKASADH LARAWNHSYG
LPVLVTNCSN NYGPFQFPEK LIPVVIRKAL AEEPIPVYAK GENVRDWLHV QDHVSALLRV
LETGMIGETY AIGGRAEVRN IDLVHVICKV LDELRPRPQG GRHADLITFV SDRPGHDFRY
AIDCSKIERE LGWKQSVTFE QGMRATVEWY LGNQAWVNAV LK
|
|---|
| |