Gene Plim_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3563 
Symbol 
ID9140281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4591160 
End bp4591975 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003631575 
Protein GI296123797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.03489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCACC AGCGGAATGC ACCACCTTCC TGCCTTCCCA CCTCATTCCC TTCTTGCCTT 
TCCGACCTTC CTCTCTTCCA ACCTTCTTCC CTTCTCCGGC CCCCGTTCAT GCACAACCCC
CTCGCCCGCC AGGTGACAGT CGTCATCCCG GTCTATGGCA GCCTCGATCA TCTCCAGAAA
TGCCTCACTT CACTCCTCGC CTGGCATCAT GTTCCCATCG TCGTCATCGA TGACGGAAAC
CCACCCGGCA CACTCCAGCA CTTCGCCTCA ATGCCCGGCT TGAAAATCAT CCGGCAACCC
CATTGCGGCG TCACCCAGGC CTGGAACAAC GGCATCGCCG TCGTCCGCAC ACCCCTCGTC
ATCCTGCTCA ACAGCGATGT CATCACCAGC GGCCCCTGGA TCGACCAGAT CCTCGCACCA
CTGCAGAAGT CAGAATCACC ACACTTTGTG CCCGCTCAAC TCACTGGTGC TGCCTGGCAA
TCGCCCACTG CCTCAGCCAG TGTCGGCATG CCGGCCCAAA GCCTGCTCGC CGGCTGGTGC
CTCGCCTTCC GCAAGTCACT CTGGCACTAC TTAAGACACT TCGACGAACG CTTCCGTCAC
TGGTATTCCG ATACCGATTT CCAAAAGCGT CTGCTGGCCA GCTCCTCCGC AGATCACACT
TCCACAAGTC CTATCCGCTG CATCGACACA CTCCCATTGA GTCACGCACT CCACGCCTCG
ACCCGACATC TCCCCGCTCG CTCACAACTC TACGCTCTCG ATCGAACCGC TTACTTCCAG
AAGTGGCAGC CTGAAGGCCA TCGACCATGC ACCTGA
 
Protein sequence
MQHQRNAPPS CLPTSFPSCL SDLPLFQPSS LLRPPFMHNP LARQVTVVIP VYGSLDHLQK 
CLTSLLAWHH VPIVVIDDGN PPGTLQHFAS MPGLKIIRQP HCGVTQAWNN GIAVVRTPLV
ILLNSDVITS GPWIDQILAP LQKSESPHFV PAQLTGAAWQ SPTASASVGM PAQSLLAGWC
LAFRKSLWHY LRHFDERFRH WYSDTDFQKR LLASSSADHT STSPIRCIDT LPLSHALHAS
TRHLPARSQL YALDRTAYFQ KWQPEGHRPC T