Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3563 |
Symbol | |
ID | 9140281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4591160 |
End bp | 4591975 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003631575 |
Protein GI | 296123797 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.03489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCACC AGCGGAATGC ACCACCTTCC TGCCTTCCCA CCTCATTCCC TTCTTGCCTT TCCGACCTTC CTCTCTTCCA ACCTTCTTCC CTTCTCCGGC CCCCGTTCAT GCACAACCCC CTCGCCCGCC AGGTGACAGT CGTCATCCCG GTCTATGGCA GCCTCGATCA TCTCCAGAAA TGCCTCACTT CACTCCTCGC CTGGCATCAT GTTCCCATCG TCGTCATCGA TGACGGAAAC CCACCCGGCA CACTCCAGCA CTTCGCCTCA ATGCCCGGCT TGAAAATCAT CCGGCAACCC CATTGCGGCG TCACCCAGGC CTGGAACAAC GGCATCGCCG TCGTCCGCAC ACCCCTCGTC ATCCTGCTCA ACAGCGATGT CATCACCAGC GGCCCCTGGA TCGACCAGAT CCTCGCACCA CTGCAGAAGT CAGAATCACC ACACTTTGTG CCCGCTCAAC TCACTGGTGC TGCCTGGCAA TCGCCCACTG CCTCAGCCAG TGTCGGCATG CCGGCCCAAA GCCTGCTCGC CGGCTGGTGC CTCGCCTTCC GCAAGTCACT CTGGCACTAC TTAAGACACT TCGACGAACG CTTCCGTCAC TGGTATTCCG ATACCGATTT CCAAAAGCGT CTGCTGGCCA GCTCCTCCGC AGATCACACT TCCACAAGTC CTATCCGCTG CATCGACACA CTCCCATTGA GTCACGCACT CCACGCCTCG ACCCGACATC TCCCCGCTCG CTCACAACTC TACGCTCTCG ATCGAACCGC TTACTTCCAG AAGTGGCAGC CTGAAGGCCA TCGACCATGC ACCTGA
|
Protein sequence | MQHQRNAPPS CLPTSFPSCL SDLPLFQPSS LLRPPFMHNP LARQVTVVIP VYGSLDHLQK CLTSLLAWHH VPIVVIDDGN PPGTLQHFAS MPGLKIIRQP HCGVTQAWNN GIAVVRTPLV ILLNSDVITS GPWIDQILAP LQKSESPHFV PAQLTGAAWQ SPTASASVGM PAQSLLAGWC LAFRKSLWHY LRHFDERFRH WYSDTDFQKR LLASSSADHT STSPIRCIDT LPLSHALHAS TRHLPARSQL YALDRTAYFQ KWQPEGHRPC T
|
| |