Gene Plim_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3478 
Symbol 
ID9140196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4497642 
End bp4498877 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content57% 
IMG OID 
Productzinc/iron permease 
Protein accessionYP_003631490 
Protein GI296123712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGT GGTTTGGCTT GAGCAGTCTG GGGTGGCAGG GAAACTCTCT GGCCGTGGCA 
GGGAGCGGTA TTTCTGCAGT CCTCATCATC TGGTGTGTGC TGGTCGCCTG CAGTTCACTT
CTGGGTGGCT GGCTTCCATC GCTGATGCGA ATCACCCACC AGCGCCTGCA ACGCATCATC
AGTGCTGTCG GTGGTTTCAT TGTCGGCGTG GCTTTGTTCC ATCAGGTGCC CCATGCCATT
CATGCTCTGG GCGATGGCGG GGTCAAAAAC CCTGTTGATC TGACGATGCT CTGGGTCGTC
ATTGGCCTGG TGGCCATGTT CGTCATGCTG CGAGTTTTCC ACTTCCACTC GCATTCACAT
GGGGAAGACG ACGCAGGACA TGCACACGAC CATGGTCATT CTCATGATCA CTCTCACAAT
CACGACCATG GGCACAATCA CGACCATGCT CATGATCATG CCCACTGCCA GTCTCACTCC
CACAGCCACG ATCCTCACGT GACATCGGCT GCAAACGCTC CCGACTCTCA GTACGCTGAC
CAAAACCTCC TGCCGATCGT CTCGTCAGCC GTCGTGGCGG ATACGTTACT TCCAGTGCTG
GATCCATCCT CCAGTTCGGC AACTCAGGCT CCTGTTCCTC CGGCGGCGCA CGATCTCAGT
TGGGTCGCCA TGACATTCGG CCTGGTCATT CACACGCTCG TCGATGGCAT GGCTCTCGCT
GCTGCTGTCA AAACGGATCA GTTGCATCTT CCGGCAGGTT CTCTCTTTGG GTTGGGAACC
TTTCTCGCCA TTGCTCTGCA TAAACCTCTC GATTCCCTCT CGATCACTTC GCTCATGCTG
GCCGCTGGCA GCCCCGCCAG GTGGCGAACT CTGGTCAACT TCGGTTACGC ACTCATGTGT
CCAGCCGGTG CCCTCTTGTT CGTACTCGGA GTGGAACAGC TTCAAGGCCA GCAGGCTTTG
ATCGTCGGTT GTGCCCTGGC GTTTTCTGCG GGCTCATTCC TGTGCATTGC CCTGGCCGAT
CTTCTCCCTG AAGTGCAGTT TCACTCCCAT GATCGCTGGC AACTGACATC TCTACTCATC
GCAGGCACCA TTGCCGCCTG GGGGATCGGC TTCCTTGAAC CGGCTCACTC CCACGGCAAT
CACGACAGCC ACGATCACAC GGGCCATGAT CACACGGGCC ATGATCATGC TCACGGCTCT
GGCGAAGTTC AGCAGCTCAG GCTGAAGGTC AAGTAA
 
Protein sequence
MSLWFGLSSL GWQGNSLAVA GSGISAVLII WCVLVACSSL LGGWLPSLMR ITHQRLQRII 
SAVGGFIVGV ALFHQVPHAI HALGDGGVKN PVDLTMLWVV IGLVAMFVML RVFHFHSHSH
GEDDAGHAHD HGHSHDHSHN HDHGHNHDHA HDHAHCQSHS HSHDPHVTSA ANAPDSQYAD
QNLLPIVSSA VVADTLLPVL DPSSSSATQA PVPPAAHDLS WVAMTFGLVI HTLVDGMALA
AAVKTDQLHL PAGSLFGLGT FLAIALHKPL DSLSITSLML AAGSPARWRT LVNFGYALMC
PAGALLFVLG VEQLQGQQAL IVGCALAFSA GSFLCIALAD LLPEVQFHSH DRWQLTSLLI
AGTIAAWGIG FLEPAHSHGN HDSHDHTGHD HTGHDHAHGS GEVQQLRLKV K