Gene Plim_3471 details

Gene Information

• Locus tag: Plim_3471
• ID: 9140189
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4489651
• End bp: 4491783
• Gene Length: 2133 bp
• Protein Length: 710 aa
• Translation table: 11
• GC content: 54%
• Product: carboxyl-terminal protease
• Protein accession: YP_003631483
• Protein GI: 296123705

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.723449
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTGT TTCAAGTCAT GGCACGCACA ACCGGGGTTT TCGCAACTCG ACTGATCTTC 
GCGGGGGCTG TTGTGGCACT GCTGGGGATT CAGGCACAGG CTCAAAACTA TGGGCCCGAT 
GAGACCAGAA GTCGCAACGA CTTTCCTGCT TATGAAGGGC GGAATAGCAC CTGGTCGAAT 
GATCGATCTG AGCGGACACG CCCGCAGCTG GATCGCCCTG TTGATCCACG CGATGAGATG 
TACTGGCCGA ACCCGGTGAG CAATTCGCTT TCTCGCCAGC AGATCGAAGA CCGTTTGTTC 
GACGATCGCA GGAACTATGG AGGATTGAAT GACCCTGTCC GATCAAATGA CTGGCAACAG 
CCGGCCCGTC GGCCATCGTC GGATCTGATC AGCGACTCCC GCGATCGTGA GCGCGATGCA 
TTTCCCTATA GCACTCAGCC CTATGGTACC GGTCGCTATG ATACGGGTCC TAACGACAAT 
GGCCGCTACG ATAGCAGTCG CTATGAAACT CGCTATCGCG AAGAGCTGTA CCGTAACGAT 
GATTCTCGGA ACCTCCCATT TGATTCCCGT TGGAACAATG CCCGTGATCG CAGCCGAGAT 
TTTGTGCCGA CAGCTCCCAG CAGCTGGGAT CGGAACAGCA ACTGGAACAA TAGCAGCAAC 
ATGCCGCAGG ATCCCCGGCT GGAACCCGCT CCTGCCACTT TGCAGAAGAA TCACCCCACA 
ATCCAGCAGT TGATTTCGAG GCGGTATCGT GATCAGAGAA TCTTGCAGAC TTTAAGCTCG 
ATGTCGCCAC AGGCTGCTGA ATCGTTCTAT CTGGAAACGG CTCAACTGAT CGATGCCCGG 
GCCTTAGCTC CTTCGGCCTA TCCGGTTCGA ACAGCAAAAG CGTTAGAAAA CCTGTATGTC 
GCGGTGGATA ACCAGGAGTT CGTGAATGCC AACCGGTTGC AGGTTGCTCC TCAACAGCGG 
GCTGCCTTTC AGCAGGCGAT TTCACAGATC GGTGGACAAG CTCAACCACG CAATGCACAG 
GAAGCGATTC AGGTCATGCG GCAGGTGGCA CAAATGAGTC AGCAAATCGT CGGTTTGCGT 
CCTCAAGTTG TCGCGATGGA GTTTACCTAT GGTGCACTGG AAACACTCGA TGAATATTCG 
ACCTTCATGC CCAATGAAGT CAGTGGCGGG CCCAGTACAC AATTGGGTGA AAGCCTGGTG 
GGGATTGGCG TAGAAATCGA AGCTCATCCT TTAGGACTCA AAGTGCTCAA GGCGATTACT 
GGCGGGCCGG CAGCACAGGC CACCATCAAG CGAGGCGACA TTATTACGAT GATTGGCGGG 
CGGTCGATTG CCGGTATGGA ACTCGATGAA GCGGCCAATC TGATCAAGGG CCCACTCGGA 
TCGATGGTGC AGCTTCAGGT GAAACGAGGT GACTACATTG CCGATATGTC GTTGATGCGG 
AGCCGAGTGC AGATTCAAAG CGTGGCTGAA GTTCGTATGG AAGATCAGGT CAACAAGGTG 
GGGTACATCA AGCTCGACAA GTTTGCCGAA ACAACCAGCC GGGAATTGGA TCAGGCTTTG 
ATGAATCTGC ACCAGCAGGG GATGCAATCG CTGATTCTCG ACTTGCGGGG AAACCCCGGC 
GGCTTATTGA CCACAGCGAT CGAAGTGACC AACCGGTTTC TGCCAGGTGG AACGATTGTC 
AGTACGAAAG GGCGTAACCA GGCGGATAAC AGTCAGGAAG TGGCCAACTA CCCGAATACC 
TGGAAAGTGC CACTGGTGGT GCTGATCGAC AACAACAGTG CCAGTGCCAG TGAGATCTTT 
GCCGCCGCAA TTCAGGATCA TCAGCGTGGC GTGGTTGTCG GTCAAAGGTC TTATGGTAAA 
GGTTCCGTTC AGACACAGTT TCCACTCAAG ACGGTGAATG GAGGATTAAA GCTGACGACG 
GCCAAATTCT ACGCTCCTTC GGGCCGGGAA ATGGCAGGTC AGGGTGTGAT TCCAGATGTC 
GCAGTTCCTC TGGCACAGAA TGCAATGGAT ACGGTGGATT ACGATATGCA GGCGGCTGTG 
AAGCTGGCCA CAGACAGCAC CACCCGCAAC ATGGCTGAGA CGATTGCCAG GCGTTATGCC 
CCGCAGAATC AGTTCTTAGG GCAGGCGGGG TAG 

 

Protein sequence

MKLFQVMART TGVFATRLIF AGAVVALLGI QAQAQNYGPD ETRSRNDFPA YEGRNSTWSN 
DRSERTRPQL DRPVDPRDEM YWPNPVSNSL SRQQIEDRLF DDRRNYGGLN DPVRSNDWQQ 
PARRPSSDLI SDSRDRERDA FPYSTQPYGT GRYDTGPNDN GRYDSSRYET RYREELYRND 
DSRNLPFDSR WNNARDRSRD FVPTAPSSWD RNSNWNNSSN MPQDPRLEPA PATLQKNHPT 
IQQLISRRYR DQRILQTLSS MSPQAAESFY LETAQLIDAR ALAPSAYPVR TAKALENLYV 
AVDNQEFVNA NRLQVAPQQR AAFQQAISQI GGQAQPRNAQ EAIQVMRQVA QMSQQIVGLR 
PQVVAMEFTY GALETLDEYS TFMPNEVSGG PSTQLGESLV GIGVEIEAHP LGLKVLKAIT 
GGPAAQATIK RGDIITMIGG RSIAGMELDE AANLIKGPLG SMVQLQVKRG DYIADMSLMR 
SRVQIQSVAE VRMEDQVNKV GYIKLDKFAE TTSRELDQAL MNLHQQGMQS LILDLRGNPG 
GLLTTAIEVT NRFLPGGTIV STKGRNQADN SQEVANYPNT WKVPLVVLID NNSASASEIF 
AAAIQDHQRG VVVGQRSYGK GSVQTQFPLK TVNGGLKLTT AKFYAPSGRE MAGQGVIPDV 
AVPLAQNAMD TVDYDMQAAV KLATDSTTRN MAETIARRYA PQNQFLGQAG