| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3428 |
|---|
| Symbol | |
|---|
| ID | 9140145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4440744 |
|---|
| End bp | 4441508 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003631440 |
|---|
| Protein GI | 296123662 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.143234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATAG CGATTGATGC AGTTGCCGAC AAACGGAAGA GTTCTTCGGA ATGGTGGGAT
CGGGCTTATT TTGAGCAGGG TCCGACATCG ATGGACAAGC TGATCTCGAA GGATGCCTCT
TGGAATGAGA TCGTCGATTC GGCTGAACAT GATCTGGTCG ATGCGTTCGC CGTCGGCGGG
ATGAATCTCG ACAACCAGGG CGACGTGCTC GAAATTGGTT GCGGTGTGGG CCGGTTGTCA
CATGCTCTGG CTCGTCGAAC CCGGCATGTG TTCGCTGTCG ATATCGCCCA GAAGTTGCTG
GAAGAGGCAC GCAAGAAACA GACACTGGCA AACATAGACT ACTATCTGCT CGATGGTCAG
CGACTGGTGA CTAATGAACT GAGAAGTGCA TTGGCTGTCT CTCGGCAGCA GGGGCATGCT
CTGCAAACCG TTTTTTCGTA CGAAGTGCTC TACTATGTCC CAGTTCCGCT GTTGAAAACT
TATTTTGCAG ATGCCTTCGA AGTTCTGGCG CCTGGTGGAG AACTGGTTTT TCAATTGAAC
TGCGAGCCGA TCAGTGCCAG AACCCGAGTG GGGTTCAAAC TTCGTGACTG GCTCTATGCC
TGCGGGATTA CCCAGTGGCG CGGATGGCCG ACGCATCCTG ATTTTCGCCG ACTGGTACAC
CCTGCTGCCG ATGTTTGCCA GTGGCTCAAA GAAATTGGCT TCGAGCAGAT CACGTCGTGT
GGTACTTTGC GGCAAAAATG GTTCCGCGGT GTGAAGCCTG CGTAG
|
|---|
| Protein sequence | MSIAIDAVAD KRKSSSEWWD RAYFEQGPTS MDKLISKDAS WNEIVDSAEH DLVDAFAVGG
MNLDNQGDVL EIGCGVGRLS HALARRTRHV FAVDIAQKLL EEARKKQTLA NIDYYLLDGQ
RLVTNELRSA LAVSRQQGHA LQTVFSYEVL YYVPVPLLKT YFADAFEVLA PGGELVFQLN
CEPISARTRV GFKLRDWLYA CGITQWRGWP THPDFRRLVH PAADVCQWLK EIGFEQITSC
GTLRQKWFRG VKPA
|
|---|
| |