Gene Plim_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3413 
Symbol 
ID9140129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp4420502 
End bp4421101 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content52% 
IMG OID 
ProductImidazoleglycerol-phosphate dehydratase 
Protein accessionYP_003631425 
Protein GI296123647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.901553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTC CACGCCAGGC CACCATTCAA CGCAATACGT TCGAAACCAA AATTCGGCTG 
TCACTCAACC TCGATGGCAG TGGCCAAGCC CAGGTGGCGA CTGGCGTTGG TTTTCTCGAT 
CACATGCTGA CGTTATTTGC TAAGCATGGT CTCTTTGATC TCGAAGTGAC CTGCGATGGC 
GATACTCACA TCGATGACCA TCACTCGACC GAAGATATCG GAATCTGCCT CGGCAAAGCT 
CTCCTTGAGG CTTTAGGCAA CAAAGCGGGA ATTGTCCGCT ATGGCAGCAT CACCTTGCCT 
ATGGAAGAAA CACTCGTCAC TTCGGCACTC GATTTGTCGG GGCGTGTGAA ATTCATCTAC 
AAGGTCGAAT TCCCCACCGA AAAGATCGGT ACGTTCGATA CCGAACTTGT GGAAGAGTTC 
TGGCAGGCTG TGGCGGCCAA TGCACTTATG AACCTGCACC TGGTGCTGCA TCACGGCACC 
AACAGCCATC ACATCAGCGA GGCCATTTTC AAAGGCACAG CCAGAGCCTT AAGACAAGCG 
GTGGCAATCG ATCCTCGACA AACAGGTGTC CCTTCTTCCA AAGGGACGTT ATCAACTTAG
 
Protein sequence
MSSPRQATIQ RNTFETKIRL SLNLDGSGQA QVATGVGFLD HMLTLFAKHG LFDLEVTCDG 
DTHIDDHHST EDIGICLGKA LLEALGNKAG IVRYGSITLP MEETLVTSAL DLSGRVKFIY 
KVEFPTEKIG TFDTELVEEF WQAVAANALM NLHLVLHHGT NSHHISEAIF KGTARALRQA 
VAIDPRQTGV PSSKGTLST