| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3402 |
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| Symbol | |
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| ID | 9140118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4405514 |
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| End bp | 4406488 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003631414 |
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| Protein GI | 296123636 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCAC CTCTTTCACG CCGGGAATGG ATCGCCACCA CGGCAGCGAC TGCTATCACT
GCAGGAGCGG CATTCACTTC ACAGCCAGCT CATGCCGCCG GAGTCGATTG GCAAGTGCAA
GATGCCCCCC CAAAAGCTGC GCGCAGGCAA CCGATTGGCG TTTCGACCTA TTCCTTCTGG
CAGTTCAAAC CAGATCAGAA ACTTTCGATT GAAGAGTGCA TTCAGAAATC TTCCGCCTAC
GGCTTTGATG GTGTCGAGAT TCTGCACCGG CAGATGACTG ACGAAACATC CGCGGGCTTG
CGCTCCATCA AGCAAGTGGC CCTGCGAGAA GGCATTCCGC TGATTGGACT TTCGACCCAT
CAGACATTTG TCTCTCCCAA GCCTGAAGTG CGTACAAAGA ATATCGAGCA CACGATTCAT
TGCCTCGAAC TGGCACACGA CCTGGGCATT CCCACCATTC GCGTCAACAC CGGCACCTGG
GGAACACGCA AGAACTTCGA CGACCTGATG GCTCACAAAG GGATCGAGGA AGTTCTGGAA
GGCTACACCG TTGATCAAGG TTTTGAATGG GTGATCGATG CGTTTGGTGA ATGTGCCCGG
GCTGCGGAAA AGCTGGGTGT GGTGATGGGA CTGGAAAATC ACTGGGGGCT GGGCCGCACG
GCCGAAGGGG TGTTGCGGGT GATTGATGCG GTCAAATCTC CGTGGCTGGA GGCGACGGTC
GATACGGGCA ACTTTCTGGA AGAGCAGTAC ACGCAATTCG AAAAACTGTT GCCGCACGCC
GTGCTGATAC AGGCCAAGAC TTATTACGGC GGCGGGAACT GGTACACACT CGACCTCGAT
TACGCCCGCT ATGCACAGTT AATCAAGGCC TCAGGATACC GCGGATTTGT CTCGCTGGAA
TTCGAGGGCA AAGCGAATGC TTCCGTAGCC ATACCACAAA GCCTCGCGAT GCTCCGCGCA
GCCTTTGCAG GGTAA
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| Protein sequence | MPAPLSRREW IATTAATAIT AGAAFTSQPA HAAGVDWQVQ DAPPKAARRQ PIGVSTYSFW
QFKPDQKLSI EECIQKSSAY GFDGVEILHR QMTDETSAGL RSIKQVALRE GIPLIGLSTH
QTFVSPKPEV RTKNIEHTIH CLELAHDLGI PTIRVNTGTW GTRKNFDDLM AHKGIEEVLE
GYTVDQGFEW VIDAFGECAR AAEKLGVVMG LENHWGLGRT AEGVLRVIDA VKSPWLEATV
DTGNFLEEQY TQFEKLLPHA VLIQAKTYYG GGNWYTLDLD YARYAQLIKA SGYRGFVSLE
FEGKANASVA IPQSLAMLRA AFAG
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