| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3398 |
|---|
| Symbol | |
|---|
| ID | 9140114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 4394766 |
|---|
| End bp | 4396340 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003631410 |
|---|
| Protein GI | 296123632 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.145395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTC ATCGACTGAT TCTGGCGATA TTGCTCCTGT TGACTTGCCG GGGTGCTATG
GCTGCGGAGC CGGCGCCACC GAATATTCTG TTCGCCATTG CGGATGACTG GGGTTATGGG
CATGCGAGTG CTTATGGCTG CCAGTGGGTG AAGACACCCG CTTTTGATCG TGTCGCCCGC
GAGGGGTTAC TCTTTCAGCA GGCATATACG CCCAATGCCA AGTGCGCACC TTCGAGAGCC
TGTATTCTCA CCGGCCGAAA CTCGTGGCAA CTCAAAGAGG CGGCCAACCA TTTGTGCTAC
TTCCCCACGG AGTTCAAAAC ATGGGGGGAA GCGTTGGCCG AGAAGGGTTG GCATGTGGGC
TATACAACCA AAGGCTGGGG GCCTGGCGAA GCGAAAGACG AGACTGGCAA GCCCCGAGCT
ATGACAGGGC AACCCTTCAA CAAGCAGAAG CTCACACCGC CTGCCCAGGG AATTGGGCCT
AATGATTATG CCTCGAATTT TGGGGATTTT CTGGCGAGTG CACCTGCTGG TAAGCCATGG
TGTTTCTGGT ATGGGAGCAT TGAGCCCCAT CGCGATTATG AGTTTGGTTC GGGGATCAAA
AAAGCGGGCA AAAAACTGAG TGAAATCGAT CATGTGCCGG GTTATTGGCC CGACAATGAA
ACGGTTCGCA CGGATCTGCT TGATTATGCC TATGAGGTGG AACACTTCGA TCAACATCTG
GGGCGGATGC TGAAGGCTCT TGAAGAGAAG GGGCTGCTGG AAAATACACT GGTGATCGTC
ACTTCTGATC ACGGCATGCC GTTTCCCAGG TGCAAAGGAG GCGCCTACGA AGCGTCCAAT
CATGTCCCGC TGGCCATGAT GTGGCCCAAA GGAATTCGAG CACCGGGGCG CTCCATCGAC
GACTTCGTGA GCTTTATTGA TCTGGCACCG ACCATTCTTG ATGTGGCATC AATCCCGTGG
AATGAAACCG GGATGGCACC GGCGACCGGT CGATCACTCA GAGACATCTT CGAATCGAAA
CAATCAGGCC GGGTCGATGC AGCGCGCGAT CATGTGCTGA TTGGTATGGA GCGGCACGAT
ATCGGTCGCC CGCTCGATGT CGGTTATCCC ATTCGTGGCA TCATCACGCA TGAGTCGCTC
TATCTGCACA ATTTTGAGCC TGATCGCTGG CCCGCGTGCA ATCCGGAAAC GGGCTATCTC
AATTGTGATG CGGGTGCGAC GAAAACGGTC ATTCTGGAAG CCCGGCGGAA AGCTGGAAGC
GATCCTTACT GGTCACTCTG TTTTGGCAAG CGGCCACGGG AAGAGTTTTA TGATCTCCAG
CAGGACCGCG ATTGCATTCA AAATCTGGCT GATGACCCGA CTCTGACAGC TCGCATGGAA
GCACTCAAAA ACCGTCTCTT TGCCCAGTTG AAGGAGGAGC AGGATCCTCG CATGGATGGC
AAGGGTTATC TTTTTGATGA ATACCCGCAC TCGAACAAAA TCCATCGCGG CTTTTACGAA
CGATTTATCA AGGGCGAGAA GCTGAATACC GGCTGGGTTG ATCCCACAGA CTATGAGCCA
GCACCCCTTG ATTGA
|
|---|
| Protein sequence | MRIHRLILAI LLLLTCRGAM AAEPAPPNIL FAIADDWGYG HASAYGCQWV KTPAFDRVAR
EGLLFQQAYT PNAKCAPSRA CILTGRNSWQ LKEAANHLCY FPTEFKTWGE ALAEKGWHVG
YTTKGWGPGE AKDETGKPRA MTGQPFNKQK LTPPAQGIGP NDYASNFGDF LASAPAGKPW
CFWYGSIEPH RDYEFGSGIK KAGKKLSEID HVPGYWPDNE TVRTDLLDYA YEVEHFDQHL
GRMLKALEEK GLLENTLVIV TSDHGMPFPR CKGGAYEASN HVPLAMMWPK GIRAPGRSID
DFVSFIDLAP TILDVASIPW NETGMAPATG RSLRDIFESK QSGRVDAARD HVLIGMERHD
IGRPLDVGYP IRGIITHESL YLHNFEPDRW PACNPETGYL NCDAGATKTV ILEARRKAGS
DPYWSLCFGK RPREEFYDLQ QDRDCIQNLA DDPTLTARME ALKNRLFAQL KEEQDPRMDG
KGYLFDEYPH SNKIHRGFYE RFIKGEKLNT GWVDPTDYEP APLD
|
|---|
| |