| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3348 |
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| Symbol | |
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| ID | 9140064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4332289 |
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| End bp | 4335426 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_003631360 |
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| Protein GI | 296123582 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTG ATGTTCCACC AACAGATCCA TCACGACCTT TGGGATCGAA CCCCAACGGT
GTGATGCCCA TGCGCACCGA TGAGTCAGTT CAGCCAGAGC ACTCGCGACT GAGTCATTTC
CTTTCGAAAG TGACCGGGTC ATGTGTCAAA AGACCATGGG CCACAATTGG CATTGCTGCC
GTTTCGGTAG TGATCTCTGC ACTGATCAGC GTCGCCTTTC TCCAGTTCAA AACCGATCGA
TCCGATCTGA TCAATCCTTC GGCAGATTTT CATCAGCGAT GGATGAAGTA TACGCAGAGT
TTCGGCGAAG CCAACGACCT GGTGGTCGTC GTCGAAGGGA AGTCTCCCGA ACGGATCAAG
CAGTCGCTCG ATGAACTGGC GGCCCTGCTC CATCAGGAAC CAGAATTCTT CAGTAATATT
TTGTACAAGG TCGAGCCCGG AGAGCTTCGC AGCAAAGGAC TGCAATACCT GGCACCCGCC
CAACTGGCCA TGGGCCTCGA GAGACTGGAC GAGTATCGTC CCATTCTGGC TGGCAACTGG
GATCTGGTAC GGCTGGAAAC TGTCGCACTG ATCCTCAAGA CGCAACTGGA AAGTGCGACG
ACGAAAGAGC AGATCCACGG ATTGCTCCAC CATGTGGATC GACTGGTCAG CAGCCTGGCA
CATGGTGTCG AGAAAGATGG CGAGTTCACC AACCCCTGGC CCGACTTGCT GACACTCGAC
CCGCAGATGA AGGCCCAGGG GAACCAGACG GTTTACCTGA TTAATGACGC GGGAACGATG
GGGTTTTTGA AAACCTCACC CGTTCAGAAA GATGCCGGTT CGTTTGAAGG ACACACGCGA
TCGATTGATC GACTGCGGGA ACTGATGTCG GATGTGACAT CGAACCTTCC GGAAGTGCAG
ATGAGCCTGA CGGGTATCCC GGTCCTTGAG AATGACGAAA TGCGAAGGTC ACAAGCCGAC
ATGGGCTGGG CTTCGATGAT CTCGGAAGCC GGTGTGCTGA TTCTGATGCT GATTTGTTTT
CGAGGTGTCA GGCATCCCAT CATCGGGATG ATCATGCTGG CAGCCGGAAC CGCCTGGACG
TTTGCCTTCA CGACATTAAC GATTGGTCAT CTGAATATTC TCTCGATCTC GTTTGTGACA
ATTCTCATCG GGCTGGGTGT CGATTTTGGG ATCCATTTTC TCGCAAGGTA CATTCAACAT
CGCCAACAAG GGATGGAGAT TCGCTCGGCA CTGGTCAATA CTTCCGGTCG AGTGGGTGTC
AGCATCCTGA CGGGGGCGAT CACTTCAGCT TTGGCGTTTT TCTGTGCAGC ATTCACCGAT
TTTTTGGGTG TTGCTGAACT GGGGCTGATT GCTGGAGCCG GAATTCTGCT CTGTGTGGTG
GCGACGTTTA CACTCTTGCC GGCCATGCTG GTGATCTCTG ATCGTCATCG ATCGGCTGCA
CAATTACCAA CTCCGTTTCA AGGTGAACTT CTTCGCAAGG CGATTCTCCA TGCACCCGGA
ACCGTGGCGA GTTTTTCAGC CGTGGTCATA CTGCTGCTCG TCGTGCAGGT CGTGGATTGG
AAAGATGGCC AACTGACGAG CCTGGTGACA TACGATCACA ATCTGCTCAA CCTGCAGGCG
CGAGGATTGG AATCGGTCGA GACGCAGAAT CGCATTTTTG CCTCGTCCGA TCATTCGTTA
CTCTTCGCGA TCTCGCTGGC AGACTCGCCA GCTCAGGTGC GAGAACTCAA GGCGAAGTTT
GAAGCGCTAC CAGAAGTTCG CAAGGTCGAA GAAATCGCGA CCAGACTTCC CGATCACTCG
GCCGATGAAA CCCGACTCCT TGTTCAAGGG TTTCATGCGC ATCTGAAACA TCTTCCCGAG
AAACTGCCCG CACCCAAGAC TTCAAATCCT GGTCGAGTCG GGCATGCCCT GGATGATCTC
TTTGCCCATC TGAAGAGCCG GCCCGAAGAA AAATCTCTGG CACTTTCACA GAAGCTCGAT
CAAACGCTCA ATCAACTGGC CGAGAAAGAG CTGCCAGAAC AGATGCAGAT TTTGAGTGAG
TTCCAGTATC GCATGTCCTA CGCCTTACTG GCTCAGTTTC AGGCCTTGCG GGCCGCAGCC
AACCCGGCAC CAGTCTCTTT GAATGATCTG CCTGCTGAAT TGACTTCCCG ATTTGTGGCT
CAGCCCAAAA ATGGGAAAGA CCAGTGGCTC TTGCAGGTTT ATCCCGCCCA GCAGATCTGG
GATATGGAAC CTTTGACGCA GTTTGTGACA GCTGTGCGAA AAGTCGATCC GAATATCACA
GGGACACCGC TGCAGAATTT TGAAGCGGCT TTGCAGATCA AGCACAGTTA TGAGATTGCT
GCCATGTATG CACTGGCAGT GATTGTGCTG GTGCTGCTGA TTGATTTCCT GCCTGGGAAG
TTGATCTGGC GTTGCCTGAT CCCAGGGATG CTGTTCGCAC TAGGTGTGGG TGTGCTGGCC
GTACTTTGCC AGGCAGTCCC TGAACTCTCT GCAAAGTTGC CACTCTGGAG CAAGCGTTGG
CTCTTCGAGA ATACACCACT GATTATGGTA GGAACCGCCA GTCTCATAAC GATGCTGGCC
GCCATGTGGC GATCACCAGG AAGCGTGGGA TTGACGCTTC TCGCGTTGAT GCCACCTGTG
GTGAGCCTCG CCATGACCTT CGGGATTCTC GTACTTATCA AGATGCCTCT CAACCCGGCG
AATCTCATTG TGCTGCCTTT GATTATCGGG CTGGGTGTCG ATAGTGGAGT GCATCTACTT
CACGATTTTC GCCATCGCGC ACCTGGCCCA TACACAGTCA CTCCCAGCCT GGTGAATGCG
ATTGTGCTGA CAGTCACGAC GACCATGGTG GGCTTTGGCG CAATGATGAT TGCTGCGCAC
AGGGGGTTGT TCAGCCTCGG GGCTGTCCTG ACGATCGGCG TGACTTGCTG CCTGTTCATT
TCGCTGGTGC CATTACCCGC GATTCTGGCA CTCCTGGCCC GCTTAAGCCC GTCGATTCTG
CACGATGCTG AGCCCGAGAT GACGATCGAT GTTAATGACG CCGATTTTGG GACACATCCA
GTACCGACAC TCGCGGACGA AACTGCGACC GACGATGATG AGCCGAGGAT CTTGAAGCAT
CCAGCTCACG TTGCCTGA
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| Protein sequence | MKSDVPPTDP SRPLGSNPNG VMPMRTDESV QPEHSRLSHF LSKVTGSCVK RPWATIGIAA
VSVVISALIS VAFLQFKTDR SDLINPSADF HQRWMKYTQS FGEANDLVVV VEGKSPERIK
QSLDELAALL HQEPEFFSNI LYKVEPGELR SKGLQYLAPA QLAMGLERLD EYRPILAGNW
DLVRLETVAL ILKTQLESAT TKEQIHGLLH HVDRLVSSLA HGVEKDGEFT NPWPDLLTLD
PQMKAQGNQT VYLINDAGTM GFLKTSPVQK DAGSFEGHTR SIDRLRELMS DVTSNLPEVQ
MSLTGIPVLE NDEMRRSQAD MGWASMISEA GVLILMLICF RGVRHPIIGM IMLAAGTAWT
FAFTTLTIGH LNILSISFVT ILIGLGVDFG IHFLARYIQH RQQGMEIRSA LVNTSGRVGV
SILTGAITSA LAFFCAAFTD FLGVAELGLI AGAGILLCVV ATFTLLPAML VISDRHRSAA
QLPTPFQGEL LRKAILHAPG TVASFSAVVI LLLVVQVVDW KDGQLTSLVT YDHNLLNLQA
RGLESVETQN RIFASSDHSL LFAISLADSP AQVRELKAKF EALPEVRKVE EIATRLPDHS
ADETRLLVQG FHAHLKHLPE KLPAPKTSNP GRVGHALDDL FAHLKSRPEE KSLALSQKLD
QTLNQLAEKE LPEQMQILSE FQYRMSYALL AQFQALRAAA NPAPVSLNDL PAELTSRFVA
QPKNGKDQWL LQVYPAQQIW DMEPLTQFVT AVRKVDPNIT GTPLQNFEAA LQIKHSYEIA
AMYALAVIVL VLLIDFLPGK LIWRCLIPGM LFALGVGVLA VLCQAVPELS AKLPLWSKRW
LFENTPLIMV GTASLITMLA AMWRSPGSVG LTLLALMPPV VSLAMTFGIL VLIKMPLNPA
NLIVLPLIIG LGVDSGVHLL HDFRHRAPGP YTVTPSLVNA IVLTVTTTMV GFGAMMIAAH
RGLFSLGAVL TIGVTCCLFI SLVPLPAILA LLARLSPSIL HDAEPEMTID VNDADFGTHP
VPTLADETAT DDDEPRILKH PAHVA
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