Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3341 |
Symbol | |
ID | 9140057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4322060 |
End bp | 4325203 |
Gene Length | 3144 bp |
Protein Length | 1047 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631353 |
Protein GI | 296123575 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGATCT CGAATATCCA TATTGATCGG TTCGGAGTCT GGGAAGATTT CGACCAGACC ATCAAGCCCA ATGGCCTGAC GGTTTTCTAC GGAACAAACG GCACTGGTAA AACCACACTG CTCAGGTTCC TCCGTTCCAT GCTCTATGGC TTCACCATTG ATGACCGGCA GATTGCCGAC CGCTGGCGAG ACCGCTTCAG CCGGGAAGGT TCGCTGGAAG TCCAGCATCA GGGGCGGACG CATCGACTGC ATCGTATGGC GACACTCGAG GGCGATGCCG GTCGTTTAAC GATTGATGGC CTCGATACCG CTCATGCAGC GAAGCCGCTT TACGAAGAAC TCATCGGCCA TCTCGACGCC CGCTTGTTTC AATCGGTCTT TGCACTCGGT CTGCCAGAAC TTCAACAACT CGGCACTCTC GAAGACGAAG CGGTCGCCCG GCATATCTAC GCCATGACTT TAGGCCCACA GGGTCGTCAG TTACAGGATG CTGTGCCCAA GCTCGAAAGC TATCAGCGAG CCATTCGCAA TCCGCAGGCG ATGTCGGGAA AACTCCTCGA ACTGGCTCAG CAGAGAACAC GTTTGCGCGC TCTCAATGAA GCCGAATCGA CTCGGCTCAA GCGGCACCGC GAACTTCTCC GCAAGCGGGA GCAACTCGAA ACCCGGCAGG AGAATCTCAC TTCCCGGCAG ACCAATCTGC AGGCCGCGTT GCTCGAAGCC CGCCATCTGC AACGTGTCTG GGAACCGTGG CGACTTGTCG GCCAGTGTCA GCGTGAGCTC AGTGGTTTGC CAGAACTGCA AGCTATTGCT CCGGATACGA TCTCGAAGCT CGATCGGATC GAAGCAGCCA TTGTGACGCT TGGGCAGGAT CGCGACACAG CCAGATCGCG TGCGCTTGCC ATCGAAGAGA AGCTCAAATC GGCCCGCAAA CTGGCTGATT TCGGACGTTT TGGCCCGAGT CTCCATGCTC TCTGGGAACA TCAGCCAGCC TGGCAGAATC AGGATACCCA TCGTCTGGCG GCCGAACAGG AACTCAATAC CGTCGAGCAG GATCTCACGC GGCGGCTTAA AGAACTGGGC CCCAAATGGA CCAGACAGCG GCTCAGTGAA ATTGTCGATA CTCCCGCGAC TCATGCCGAG CTTCTCAGCT CGGCCCGTGG TTATCAGGAT ATGCGGGCCC GGCAACTGGC CAGGCAGCGT CGCTATCGCA AAAAGTCGAG TGTCTGCCAC GACCGCGAGT TGGCGCTGCG TACGACTCTT CTTGAACTGG GCATTCAAAG CGAGACCATC GAAGAGCCTT TGCACTTTGC TCGCCAGAGA CTGGCTCATG TCGTCGAACT GGGCCGCTTG CGGATTGCTG CTGGCGAACA TCTCGAACGA ATTCGCGAAA TTGAAAAGCA GCTCGAACGG ATTCGCGTTC ATTCCAGCAT GCCCCCCTGG ATTTTTACAC TGCTCTTCCT GTTTCTGGCG GCTGGCGTCG GGCTCCTCTT CTGGGGAGCA TTAACGTCGA TCACCACAGG TGTGCTGGTG GGGACGATCT ATGCCCTGGT GGGGGTCATG GCCATCAGCC TCTCGTATGG ACTCAAGGTT CAATTCGAGC GTGATGCGGA AGATCAACTG CGTGCCATTC GTGAAAGTCG CCGGGATTAT CAGGTGCGTC TGCACGAAGC CCGCGAGCAG ATGCGCGATC TCGCCCAGAC CCACGACCTG ATGGATGCTG CTGAACTCGA GCAGTGGATG CAGGGGGCCA ATGATGGCGG TCTGATTGCG CAGGCCGCTG CCCGCCTGGC GGATCTTGAA AAACTGCAGC GGCAATTTCA GGAAATTCGC CGTGTCCGCA AGTCGTTAAG TGCCGCTCGT AAGAAACTTC AGGAAGGCCA GCGCGAACTC GCTCAGGCCC GGCACGACTG GAGCCGCAAA CTGGCGGGTA TCGGTCTGGA TGAAACCACT TCGGTCTCCA ATGCCTACTC CAGTTGGGAA AGAGTCCATG GTGCCTTCGA GCAATTGGCA CGTTCGCGAG AGCTGAGTCA TCGCCTGAAC GGGATTCGTG CTGAGCAGCA GGTCTTTCGG CAGAAAGTTG AAACTCTTGC TAAACGGATG GGCCAGAGTC TGCCGGCCAA TGCCAATCTC TGGCTGCCAC TGGAGAACTG GCGTAAAGAT CTCACGACCG CCCTGGAAAA ACGGAAGGCC AAACGCAAGC TCGACCGCAT GCTCGAAAGT CGGCAGGAAC TTCGCTTCCA GCTTGATCGC AAACTTGAGC AGCAGCATCT GGATCGTACG GCGATGCTCA GTGCTGCCGG TGTCCGCGAC CGCGAAGGCT TGATTGATCG AATCAAGACT TGGGAAAAGC GTAAAGAATG GGAACTGCGC CTCAAGCAGG CTCAGCATGA TCTTGAACAG GCTGTGCAGT CACAACCCAC ACTGGCCATC ACCGAAGATG TGCTGCAGAA ATTCAATCGC ACACAGAACG ATCAAAGGAT TGGTGAACTC ACCAAAGATC TGGCAATTGT CGAGCAGGAT CTCAAGAAGC TTTACGAAGA ACTGGGAAGT GTCAAACAGG AGACCAGGAC TCTTGAAGCG GATACTTCCG GCATGACGCG CCGGCTCGAA CTGGCCACAC TTGAGCAGCA GATGCGTACT GGTCTTGAGG ACTGGTATGC AGCGGCTCTT GCCGGTCAGA GTATGGAAGA GTTAAGGCAG CGCTTCGAGC GCACCAATCA GCCTCAATTG CTGGCCGAAG CTTCGCCATT CCTCTCGAAG CTCACCTGTG GCCAATACCC GAATATCTGG ACACCACTGG GACAGCATGC GCTGTGCGTC GATGATGATC GTCAACAGCC GTGGCCCGTC CAGATGCTTT CTGGCGGCAC CCGTGAACAA CTCTTCCTCG CCATTCGACT GGCCATGGTG CGAAGGTTTA CGGCCCGAAA TATCGAATTG CCCATGATTC TTGACGATGT GACTGTCAAC TTTGACGAAC ACCGCTCAGG TGCTGCCGTC GATACGCTCA TCGATTTTGC TTCGACTGGG CAGCAGGTCC TGGTCTTTAC CAGCCACATG AGTTTTGCCG AGCAGTTCCA GTCTCGCGGG GTTGAACCTG TCTGGCTCTC ACGATTGGAA ACGCAGGCCC GTCGGGCTGG TTGA
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Protein sequence | MKISNIHIDR FGVWEDFDQT IKPNGLTVFY GTNGTGKTTL LRFLRSMLYG FTIDDRQIAD RWRDRFSREG SLEVQHQGRT HRLHRMATLE GDAGRLTIDG LDTAHAAKPL YEELIGHLDA RLFQSVFALG LPELQQLGTL EDEAVARHIY AMTLGPQGRQ LQDAVPKLES YQRAIRNPQA MSGKLLELAQ QRTRLRALNE AESTRLKRHR ELLRKREQLE TRQENLTSRQ TNLQAALLEA RHLQRVWEPW RLVGQCQREL SGLPELQAIA PDTISKLDRI EAAIVTLGQD RDTARSRALA IEEKLKSARK LADFGRFGPS LHALWEHQPA WQNQDTHRLA AEQELNTVEQ DLTRRLKELG PKWTRQRLSE IVDTPATHAE LLSSARGYQD MRARQLARQR RYRKKSSVCH DRELALRTTL LELGIQSETI EEPLHFARQR LAHVVELGRL RIAAGEHLER IREIEKQLER IRVHSSMPPW IFTLLFLFLA AGVGLLFWGA LTSITTGVLV GTIYALVGVM AISLSYGLKV QFERDAEDQL RAIRESRRDY QVRLHEAREQ MRDLAQTHDL MDAAELEQWM QGANDGGLIA QAAARLADLE KLQRQFQEIR RVRKSLSAAR KKLQEGQREL AQARHDWSRK LAGIGLDETT SVSNAYSSWE RVHGAFEQLA RSRELSHRLN GIRAEQQVFR QKVETLAKRM GQSLPANANL WLPLENWRKD LTTALEKRKA KRKLDRMLES RQELRFQLDR KLEQQHLDRT AMLSAAGVRD REGLIDRIKT WEKRKEWELR LKQAQHDLEQ AVQSQPTLAI TEDVLQKFNR TQNDQRIGEL TKDLAIVEQD LKKLYEELGS VKQETRTLEA DTSGMTRRLE LATLEQQMRT GLEDWYAAAL AGQSMEELRQ RFERTNQPQL LAEASPFLSK LTCGQYPNIW TPLGQHALCV DDDRQQPWPV QMLSGGTREQ LFLAIRLAMV RRFTARNIEL PMILDDVTVN FDEHRSGAAV DTLIDFASTG QQVLVFTSHM SFAEQFQSRG VEPVWLSRLE TQARRAG
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