Gene Plim_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3341 
Symbol 
ID9140057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4322060 
End bp4325203 
Gene Length3144 bp 
Protein Length1047 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631353 
Protein GI296123575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATCT CGAATATCCA TATTGATCGG TTCGGAGTCT GGGAAGATTT CGACCAGACC 
ATCAAGCCCA ATGGCCTGAC GGTTTTCTAC GGAACAAACG GCACTGGTAA AACCACACTG
CTCAGGTTCC TCCGTTCCAT GCTCTATGGC TTCACCATTG ATGACCGGCA GATTGCCGAC
CGCTGGCGAG ACCGCTTCAG CCGGGAAGGT TCGCTGGAAG TCCAGCATCA GGGGCGGACG
CATCGACTGC ATCGTATGGC GACACTCGAG GGCGATGCCG GTCGTTTAAC GATTGATGGC
CTCGATACCG CTCATGCAGC GAAGCCGCTT TACGAAGAAC TCATCGGCCA TCTCGACGCC
CGCTTGTTTC AATCGGTCTT TGCACTCGGT CTGCCAGAAC TTCAACAACT CGGCACTCTC
GAAGACGAAG CGGTCGCCCG GCATATCTAC GCCATGACTT TAGGCCCACA GGGTCGTCAG
TTACAGGATG CTGTGCCCAA GCTCGAAAGC TATCAGCGAG CCATTCGCAA TCCGCAGGCG
ATGTCGGGAA AACTCCTCGA ACTGGCTCAG CAGAGAACAC GTTTGCGCGC TCTCAATGAA
GCCGAATCGA CTCGGCTCAA GCGGCACCGC GAACTTCTCC GCAAGCGGGA GCAACTCGAA
ACCCGGCAGG AGAATCTCAC TTCCCGGCAG ACCAATCTGC AGGCCGCGTT GCTCGAAGCC
CGCCATCTGC AACGTGTCTG GGAACCGTGG CGACTTGTCG GCCAGTGTCA GCGTGAGCTC
AGTGGTTTGC CAGAACTGCA AGCTATTGCT CCGGATACGA TCTCGAAGCT CGATCGGATC
GAAGCAGCCA TTGTGACGCT TGGGCAGGAT CGCGACACAG CCAGATCGCG TGCGCTTGCC
ATCGAAGAGA AGCTCAAATC GGCCCGCAAA CTGGCTGATT TCGGACGTTT TGGCCCGAGT
CTCCATGCTC TCTGGGAACA TCAGCCAGCC TGGCAGAATC AGGATACCCA TCGTCTGGCG
GCCGAACAGG AACTCAATAC CGTCGAGCAG GATCTCACGC GGCGGCTTAA AGAACTGGGC
CCCAAATGGA CCAGACAGCG GCTCAGTGAA ATTGTCGATA CTCCCGCGAC TCATGCCGAG
CTTCTCAGCT CGGCCCGTGG TTATCAGGAT ATGCGGGCCC GGCAACTGGC CAGGCAGCGT
CGCTATCGCA AAAAGTCGAG TGTCTGCCAC GACCGCGAGT TGGCGCTGCG TACGACTCTT
CTTGAACTGG GCATTCAAAG CGAGACCATC GAAGAGCCTT TGCACTTTGC TCGCCAGAGA
CTGGCTCATG TCGTCGAACT GGGCCGCTTG CGGATTGCTG CTGGCGAACA TCTCGAACGA
ATTCGCGAAA TTGAAAAGCA GCTCGAACGG ATTCGCGTTC ATTCCAGCAT GCCCCCCTGG
ATTTTTACAC TGCTCTTCCT GTTTCTGGCG GCTGGCGTCG GGCTCCTCTT CTGGGGAGCA
TTAACGTCGA TCACCACAGG TGTGCTGGTG GGGACGATCT ATGCCCTGGT GGGGGTCATG
GCCATCAGCC TCTCGTATGG ACTCAAGGTT CAATTCGAGC GTGATGCGGA AGATCAACTG
CGTGCCATTC GTGAAAGTCG CCGGGATTAT CAGGTGCGTC TGCACGAAGC CCGCGAGCAG
ATGCGCGATC TCGCCCAGAC CCACGACCTG ATGGATGCTG CTGAACTCGA GCAGTGGATG
CAGGGGGCCA ATGATGGCGG TCTGATTGCG CAGGCCGCTG CCCGCCTGGC GGATCTTGAA
AAACTGCAGC GGCAATTTCA GGAAATTCGC CGTGTCCGCA AGTCGTTAAG TGCCGCTCGT
AAGAAACTTC AGGAAGGCCA GCGCGAACTC GCTCAGGCCC GGCACGACTG GAGCCGCAAA
CTGGCGGGTA TCGGTCTGGA TGAAACCACT TCGGTCTCCA ATGCCTACTC CAGTTGGGAA
AGAGTCCATG GTGCCTTCGA GCAATTGGCA CGTTCGCGAG AGCTGAGTCA TCGCCTGAAC
GGGATTCGTG CTGAGCAGCA GGTCTTTCGG CAGAAAGTTG AAACTCTTGC TAAACGGATG
GGCCAGAGTC TGCCGGCCAA TGCCAATCTC TGGCTGCCAC TGGAGAACTG GCGTAAAGAT
CTCACGACCG CCCTGGAAAA ACGGAAGGCC AAACGCAAGC TCGACCGCAT GCTCGAAAGT
CGGCAGGAAC TTCGCTTCCA GCTTGATCGC AAACTTGAGC AGCAGCATCT GGATCGTACG
GCGATGCTCA GTGCTGCCGG TGTCCGCGAC CGCGAAGGCT TGATTGATCG AATCAAGACT
TGGGAAAAGC GTAAAGAATG GGAACTGCGC CTCAAGCAGG CTCAGCATGA TCTTGAACAG
GCTGTGCAGT CACAACCCAC ACTGGCCATC ACCGAAGATG TGCTGCAGAA ATTCAATCGC
ACACAGAACG ATCAAAGGAT TGGTGAACTC ACCAAAGATC TGGCAATTGT CGAGCAGGAT
CTCAAGAAGC TTTACGAAGA ACTGGGAAGT GTCAAACAGG AGACCAGGAC TCTTGAAGCG
GATACTTCCG GCATGACGCG CCGGCTCGAA CTGGCCACAC TTGAGCAGCA GATGCGTACT
GGTCTTGAGG ACTGGTATGC AGCGGCTCTT GCCGGTCAGA GTATGGAAGA GTTAAGGCAG
CGCTTCGAGC GCACCAATCA GCCTCAATTG CTGGCCGAAG CTTCGCCATT CCTCTCGAAG
CTCACCTGTG GCCAATACCC GAATATCTGG ACACCACTGG GACAGCATGC GCTGTGCGTC
GATGATGATC GTCAACAGCC GTGGCCCGTC CAGATGCTTT CTGGCGGCAC CCGTGAACAA
CTCTTCCTCG CCATTCGACT GGCCATGGTG CGAAGGTTTA CGGCCCGAAA TATCGAATTG
CCCATGATTC TTGACGATGT GACTGTCAAC TTTGACGAAC ACCGCTCAGG TGCTGCCGTC
GATACGCTCA TCGATTTTGC TTCGACTGGG CAGCAGGTCC TGGTCTTTAC CAGCCACATG
AGTTTTGCCG AGCAGTTCCA GTCTCGCGGG GTTGAACCTG TCTGGCTCTC ACGATTGGAA
ACGCAGGCCC GTCGGGCTGG TTGA
 
Protein sequence
MKISNIHIDR FGVWEDFDQT IKPNGLTVFY GTNGTGKTTL LRFLRSMLYG FTIDDRQIAD 
RWRDRFSREG SLEVQHQGRT HRLHRMATLE GDAGRLTIDG LDTAHAAKPL YEELIGHLDA
RLFQSVFALG LPELQQLGTL EDEAVARHIY AMTLGPQGRQ LQDAVPKLES YQRAIRNPQA
MSGKLLELAQ QRTRLRALNE AESTRLKRHR ELLRKREQLE TRQENLTSRQ TNLQAALLEA
RHLQRVWEPW RLVGQCQREL SGLPELQAIA PDTISKLDRI EAAIVTLGQD RDTARSRALA
IEEKLKSARK LADFGRFGPS LHALWEHQPA WQNQDTHRLA AEQELNTVEQ DLTRRLKELG
PKWTRQRLSE IVDTPATHAE LLSSARGYQD MRARQLARQR RYRKKSSVCH DRELALRTTL
LELGIQSETI EEPLHFARQR LAHVVELGRL RIAAGEHLER IREIEKQLER IRVHSSMPPW
IFTLLFLFLA AGVGLLFWGA LTSITTGVLV GTIYALVGVM AISLSYGLKV QFERDAEDQL
RAIRESRRDY QVRLHEAREQ MRDLAQTHDL MDAAELEQWM QGANDGGLIA QAAARLADLE
KLQRQFQEIR RVRKSLSAAR KKLQEGQREL AQARHDWSRK LAGIGLDETT SVSNAYSSWE
RVHGAFEQLA RSRELSHRLN GIRAEQQVFR QKVETLAKRM GQSLPANANL WLPLENWRKD
LTTALEKRKA KRKLDRMLES RQELRFQLDR KLEQQHLDRT AMLSAAGVRD REGLIDRIKT
WEKRKEWELR LKQAQHDLEQ AVQSQPTLAI TEDVLQKFNR TQNDQRIGEL TKDLAIVEQD
LKKLYEELGS VKQETRTLEA DTSGMTRRLE LATLEQQMRT GLEDWYAAAL AGQSMEELRQ
RFERTNQPQL LAEASPFLSK LTCGQYPNIW TPLGQHALCV DDDRQQPWPV QMLSGGTREQ
LFLAIRLAMV RRFTARNIEL PMILDDVTVN FDEHRSGAAV DTLIDFASTG QQVLVFTSHM
SFAEQFQSRG VEPVWLSRLE TQARRAG