Gene Plim_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3340 
Symbol 
ID9140056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4321084 
End bp4321884 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631352 
Protein GI296123574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACAT CGGCTGCTGC CAGTGAACCC GCTCCGGAGG AAAATCCTCT CGATCGACTG 
GAAGCTTTGC GTGAGCGGTT GATCCAGCAT CCGATCTATC AGGAGGTGAA CTCGCTGGGC
CGCATTCGCC TGTTCATGAG AGAACATGCT TTTGCTGTGT GGGATTTCAT GTCGTTACTC
AAACGGATGC AGCAACTTTG TACCTGCACC ACAGTTCCGT GGGTCCCTTC GCCTCGACCG
GAACTGAGCC GCTTTATCAA TGAAATTGTG CTCGGTGAAG AGTGTGATGA AGATGGTCGT
GGTGGCTACA TCAGCCATTA CGCATTGTAT CTTGAAGCCA TGACCGAACT GGGTGCGGAT
CCGAAGCCGA TTCAGCAACT GGTTTCCCGT ATCGGGAACG GTGCCGATAC CTATCGAGTC
CTTGAGCAGC TGCCCGTGCT TTCCGCGACC AAAGAGTTTG TCCGCTTTAC GTTGCAGTTG
TGCCGGGTGG GGCAGCCTCA TGAGGTTGCC GCGGTCTTCT TTTACAGCCG GGAAGACATC
ATTCCCGAGA TGTTCAGCCG GTTGATTCCT GTACTCGAAC CGCAGCAGGT TCCTGTCGGT
CGCCTGCTGC ATTATCTTCA TCGACATGTT GAGTTAGACG GAGATCGTCA CGGGCCACTG
GCTCGTCTGG CCATGGAGCA TCTTTGTGAA GGGAATGCTC AATGGCAACA ACAGGCACTC
GTAGCCGCCG GAAGAGCCAT TGAGCACCGC CTTGCACTCT GGGATGGACT CTTGAAAGCC
TTTCAGGATC AGGGGCTTTA A
 
Protein sequence
MKTSAAASEP APEENPLDRL EALRERLIQH PIYQEVNSLG RIRLFMREHA FAVWDFMSLL 
KRMQQLCTCT TVPWVPSPRP ELSRFINEIV LGEECDEDGR GGYISHYALY LEAMTELGAD
PKPIQQLVSR IGNGADTYRV LEQLPVLSAT KEFVRFTLQL CRVGQPHEVA AVFFYSREDI
IPEMFSRLIP VLEPQQVPVG RLLHYLHRHV ELDGDRHGPL ARLAMEHLCE GNAQWQQQAL
VAAGRAIEHR LALWDGLLKA FQDQGL