| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3316 |
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| Symbol | |
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| ID | 9140031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4287054 |
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| End bp | 4287995 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003631328 |
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| Protein GI | 296123550 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGG GTTATAACAC GAACGGGCTG AGTGATCACC GCTGGGAAGA CGCATTGGAA
CTCATTGCCA AAGCGGGTTA TCGCTCCGTG GCGATTACGG TCGATCATCA CTGTCTGGAT
CCTTTTGCTG TCGATTTTCC CCGGCAGCTC GAGCGATATC AGCGGGCACT CAAGAAGCTC
GGCCTTTCAT GTGTGATTGA AACCGGTGCG CGGTTCCTTC TGGATCCTCT CAAAAAGCAT
GAGCCGACAC TCATCAGCGG TGATGCCAGA GCCCGCCAGC GACGCATTGA TTTTTTGAAG
CGGGCGATTC ACCTCGCCGA TGACCTTGAA GCGGATTGCG TCTCGTTCTG GTCGGGAATT
CTTCGAGAGC CCTGGCCACG CGAAAAGACG ATGGAGATTC TCGCGGAAGG GATTCGCGAA
GTCTGCCAGC ATGCTGCCCA TTACGGGATC AAGCTCGGAT TTGAACCTGA ACCCGGCATG
TTTATCGAAA CGATGGCCGA CTTTCGCGAA CTGGATGAGC GGGTCGGGCA GCCAAATCTC
GATTTAACAA TCGATGTCGG GCATCTGTAC TGCGTGGAGA AGCCTGTGAT GAATGCTAAA
TCCGTGCTTT CAGAATCAAC ATCGCGATCA GAAGCTGGAC AGAAACAGGA GCGTATTACA
ACTGCCGAGA CCTGCTCACT CCGTCGGCGG CAGACCGAAC TGCTGGTCAT CCCGCATCTA
TTGGAATGGG GCCCGCGGAT CGTGAATGTC CACCTTGAAG ACATGCGGCG TGGTGTGCAT
GAGCACTTGC GTTTTGGAGA AGGTGAAATC GATTTCGCCG CCGTCATGCA GGCCGTTCGC
GATATCTCGT ATCAGGGCGG CCTGCATGTG GAACTGAGCA GGCACTCTTA CATGGCCCCA
CAGGTGCTGC AGGAATCGTT TGAGTTCCTG AGCCAGTTGT AA
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| Protein sequence | MKLGYNTNGL SDHRWEDALE LIAKAGYRSV AITVDHHCLD PFAVDFPRQL ERYQRALKKL
GLSCVIETGA RFLLDPLKKH EPTLISGDAR ARQRRIDFLK RAIHLADDLE ADCVSFWSGI
LREPWPREKT MEILAEGIRE VCQHAAHYGI KLGFEPEPGM FIETMADFRE LDERVGQPNL
DLTIDVGHLY CVEKPVMNAK SVLSESTSRS EAGQKQERIT TAETCSLRRR QTELLVIPHL
LEWGPRIVNV HLEDMRRGVH EHLRFGEGEI DFAAVMQAVR DISYQGGLHV ELSRHSYMAP
QVLQESFEFL SQL
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