Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3299 |
Symbol | |
ID | 9140014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4256925 |
End bp | 4257983 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631311 |
Protein GI | 296123533 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.153533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCTG AGTTTCGATT CCAGGGGATG ACCTGTTTGT TTTTTGTAAC TTGTTTTGTG GTAGGTTTTT GTGGTTTTTT TGAAAGCCTG TCGGCCAATG ATCAGCCCGC TGCGGAAAAT CCAATTCGGC AGATCTTCAC AGCCGGTTTT GCGGAAATCG CCCTGTTCGA TCTGAACAAG GTTTCTGTCG ATGAAGCTCA GTCGGCACTT CCTCCCCCAC TCTGGAGTTG GAAAGCGAGT GGTCGCGAGG AGTTGCCAGT TGTGCGGCAG AAGCAGTTTG GCACAACGGA TGAAATCAAG CTGGTGGATG GCGGGAAGCA GTTGCTGGTC ACTTCGTCGG GTGGTGGCTG TGCCTTGATT CAAAGGGTGG CGACGCCTCA AGTTCCCACA GGGACTGTCC TGTGGTCAGC CACGGTCGCG AATGCCCATT CGATTGAACC CTTGCCAAGC AATCGAGTGG TAGTGGCGGC CAGTACCGCC AAAGCTGGTA ATAAACTGGT GGTTTTCGAT CTGGCGAAAG GGGATGAGCC GCTGGCTGAG ACCCCGCTGT ATTCGGCACA TGGCGTGGTC TGGGATCATC AGCGGCAGAG GCTTTATGCC GTCGGTTTTC GCGAATTGAA TTGCTACGAG TTAACGACTG ATGGCGATGG CAAATGTTCA CTGCGTCTCG ATGAAACCAA TCCGCTTCCC GATGAAGGGG GGCATGATCT GCAACCTGTT CCCGATTCCC GGGATCTGAG TATTACAACT CACGATCATG TCTATCTTTT CGACCGGAAC ACAAAGTCAT TTCGCAAGCA TCCCGTTCTG GGTGATTATC AGCACATGAA ATGTGTCAGT TTTCGGCGGG AGGGCCAGCA ACTGGAAACT TTGTTCGTGC AAGCGAGTGA CGAACATTGG TGGAGCCACT CGATGGGTCT GTTCACCCAG CCTGTTTCCA TCACGATGAC TGAAGCTGGT CAGGAATCGA TCCGTATCGA AGCGCAACCC CCGGTGGGCA TCACTCAGAT TCCATTAGGT AAGCTGGGGG TCTACAAAGT TCGCTGGCTC GGGAAATAG
|
Protein sequence | MKSEFRFQGM TCLFFVTCFV VGFCGFFESL SANDQPAAEN PIRQIFTAGF AEIALFDLNK VSVDEAQSAL PPPLWSWKAS GREELPVVRQ KQFGTTDEIK LVDGGKQLLV TSSGGGCALI QRVATPQVPT GTVLWSATVA NAHSIEPLPS NRVVVAASTA KAGNKLVVFD LAKGDEPLAE TPLYSAHGVV WDHQRQRLYA VGFRELNCYE LTTDGDGKCS LRLDETNPLP DEGGHDLQPV PDSRDLSITT HDHVYLFDRN TKSFRKHPVL GDYQHMKCVS FRREGQQLET LFVQASDEHW WSHSMGLFTQ PVSITMTEAG QESIRIEAQP PVGITQIPLG KLGVYKVRWL GK
|
| |