Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3239 |
Symbol | |
ID | 9139954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4183175 |
End bp | 4184266 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631252 |
Protein GI | 296123474 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0081017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTACT TCACAGACCT CTTTACCGTT AAGACCTACG AAGCGTTCCT GAATTCACCA CGTGAGTTTT CTGGATTTCG CGAATCACAG CAAAGGATGG CAGATCGACT AAAGCCCGGG GATAAACTCC TCTGCTATGT CAACGGTCTA TCGCGGTGGG CTGCAGTGCT TGAGGTTTCG GATAAGGCCT TTATCGACCG CACCCCTTTG TTCGTCGAAG ACAACGACCC TTTCGCCGTA CGAGTTCCCG TTAAGACCGT TTGCTCGCTT CCACTGGAAA ATGCAATACC CATTCGCACG GAAAACATTT TCGATAATCT CAGTTTCACC AAGGGAAAGG GAGACGGATA CTGGCTTGGG CCCCTTCGAC GCAGCTTGCA ACACATCTCC GATGCCGACG GGAAACTCTT GGAAGCTGCG CTGATGGAAC AATTAGCCGT TAAGAGGACG TATCCCCTTG ACCAGAAGAA GTTCGATCGA CTTCAAGGAA CGACCGTCAA TCGTGCGGAC GGAGCGGTGA CCGTAACAGT CCCCGACGAT GAAACGGACG TCACCTCGAG CAAAGGAAAG TCGGATTGGG AATCAATCAG GATGCAGGCA GCGATTGCCA AGTTGGGCGA GGAGATGGGT TTTCGTATCT GGCTTCCAAA AAACGACCGG AGTGCAGTCT GCGCAAACTG GAAACCTCAA GCAGGAACAC TGATCGACGT TCTGCCACTG AACTACGATA ATGTGACAAT CGCCACGATA GAGCAGATTG ATGTCCTCTG GCTTAAGGGA CGTTCAATCA GGAGAGCTTT CGAAGTCGAG CACACGACGG CGATCTACTC GGGAATTTTG CGCATGGCCG ATCTTTTGGC CTTACAGCCT AACATGAATA TCTTGCTCCA CATTGTTGCC CCTATGCTAC GACAGGAGAA GGTTTTCACA GAGATTCGAC GACCTGTCTT CTCCATGCTA GAAGGAAAGC CGCTCGTGGA ACAATGCACT TTCATCGCGT ACGAGGACTT GAAGGAAATC ATGAATCTTC CACACCTTAG CCATTTATCT GATTCCATCA TCAGTGAGTA CGAGGTCGTA GCGGTCGATT AG
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Protein sequence | MAYFTDLFTV KTYEAFLNSP REFSGFRESQ QRMADRLKPG DKLLCYVNGL SRWAAVLEVS DKAFIDRTPL FVEDNDPFAV RVPVKTVCSL PLENAIPIRT ENIFDNLSFT KGKGDGYWLG PLRRSLQHIS DADGKLLEAA LMEQLAVKRT YPLDQKKFDR LQGTTVNRAD GAVTVTVPDD ETDVTSSKGK SDWESIRMQA AIAKLGEEMG FRIWLPKNDR SAVCANWKPQ AGTLIDVLPL NYDNVTIATI EQIDVLWLKG RSIRRAFEVE HTTAIYSGIL RMADLLALQP NMNILLHIVA PMLRQEKVFT EIRRPVFSML EGKPLVEQCT FIAYEDLKEI MNLPHLSHLS DSIISEYEVV AVD
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