Gene Plim_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3239 
Symbol 
ID9139954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4183175 
End bp4184266 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631252 
Protein GI296123474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0081017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACT TCACAGACCT CTTTACCGTT AAGACCTACG AAGCGTTCCT GAATTCACCA 
CGTGAGTTTT CTGGATTTCG CGAATCACAG CAAAGGATGG CAGATCGACT AAAGCCCGGG
GATAAACTCC TCTGCTATGT CAACGGTCTA TCGCGGTGGG CTGCAGTGCT TGAGGTTTCG
GATAAGGCCT TTATCGACCG CACCCCTTTG TTCGTCGAAG ACAACGACCC TTTCGCCGTA
CGAGTTCCCG TTAAGACCGT TTGCTCGCTT CCACTGGAAA ATGCAATACC CATTCGCACG
GAAAACATTT TCGATAATCT CAGTTTCACC AAGGGAAAGG GAGACGGATA CTGGCTTGGG
CCCCTTCGAC GCAGCTTGCA ACACATCTCC GATGCCGACG GGAAACTCTT GGAAGCTGCG
CTGATGGAAC AATTAGCCGT TAAGAGGACG TATCCCCTTG ACCAGAAGAA GTTCGATCGA
CTTCAAGGAA CGACCGTCAA TCGTGCGGAC GGAGCGGTGA CCGTAACAGT CCCCGACGAT
GAAACGGACG TCACCTCGAG CAAAGGAAAG TCGGATTGGG AATCAATCAG GATGCAGGCA
GCGATTGCCA AGTTGGGCGA GGAGATGGGT TTTCGTATCT GGCTTCCAAA AAACGACCGG
AGTGCAGTCT GCGCAAACTG GAAACCTCAA GCAGGAACAC TGATCGACGT TCTGCCACTG
AACTACGATA ATGTGACAAT CGCCACGATA GAGCAGATTG ATGTCCTCTG GCTTAAGGGA
CGTTCAATCA GGAGAGCTTT CGAAGTCGAG CACACGACGG CGATCTACTC GGGAATTTTG
CGCATGGCCG ATCTTTTGGC CTTACAGCCT AACATGAATA TCTTGCTCCA CATTGTTGCC
CCTATGCTAC GACAGGAGAA GGTTTTCACA GAGATTCGAC GACCTGTCTT CTCCATGCTA
GAAGGAAAGC CGCTCGTGGA ACAATGCACT TTCATCGCGT ACGAGGACTT GAAGGAAATC
ATGAATCTTC CACACCTTAG CCATTTATCT GATTCCATCA TCAGTGAGTA CGAGGTCGTA
GCGGTCGATT AG
 
Protein sequence
MAYFTDLFTV KTYEAFLNSP REFSGFRESQ QRMADRLKPG DKLLCYVNGL SRWAAVLEVS 
DKAFIDRTPL FVEDNDPFAV RVPVKTVCSL PLENAIPIRT ENIFDNLSFT KGKGDGYWLG
PLRRSLQHIS DADGKLLEAA LMEQLAVKRT YPLDQKKFDR LQGTTVNRAD GAVTVTVPDD
ETDVTSSKGK SDWESIRMQA AIAKLGEEMG FRIWLPKNDR SAVCANWKPQ AGTLIDVLPL
NYDNVTIATI EQIDVLWLKG RSIRRAFEVE HTTAIYSGIL RMADLLALQP NMNILLHIVA
PMLRQEKVFT EIRRPVFSML EGKPLVEQCT FIAYEDLKEI MNLPHLSHLS DSIISEYEVV
AVD