Gene Plim_3229 details

Gene Information

• Locus tag: Plim_3229
• ID: 9139944
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 4167298
• End bp: 4170813
• Gene Length: 3516 bp
• Protein Length: 1171 aa
• Translation table: 11
• GC content: 57%
• Product: protein of unknown function DUF1549
• Protein accession: YP_003631242
• Protein GI: 296123464

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTT ACAGCACCAG TCACTGGTTG GGATCATTCA TCGGCTGTGG AATCGCGTTT 
CTAACGTTCG TGCCATCCGC CCAGGCCGAA TCTGTCAGCT TTGTGCGCGA TATCAAGCCG 
ATCCTTTCCA ATGCCTGCTT TCATTGCCAC GGCCCGGATG AAGCCGACCG CAAGGGAGGC 
ACCGATGGAT TGAGGTTAGA TACATTCGAA GGAGCCACTG CGGATCTGGG TGGGGGTGCT 
CAGGCCATCA AGGCGGGCCA CCCGGAAGCC AGTGGGATGA TCGAGCGCAT CCTTTCGACA 
GACGCAGATC TGGTAATGCC GCCACCTTCC GTGGGGCGAA AACTCAGTCC CCGCGAAGTG 
GATCTGCTCA AGAAGTGGAT TTCTGAAGGG GCGAAGTACG AGCCGCACTG GAGCTATGTC 
AAACCCGTGC GTCCGGTCAT CGTGGCCACG CAGCATCAAC CGGATCAATC GCCAGCGGTG 
ATGGCCGGCG CAATTGATGA ACTGGTTCAG CGAAAGCTCA AAGAGTTGAA TCTCAAACCT 
GCTGCGGAAG CTGATCGCGA AGCCTTGATT CGACGGGTGA GCCTCGATTT AACGGGCCTG 
CCGCCGACGC GTGAAGAGCT GCAGGCGTTT CTTGAAGATA CCTCTTCCAA CGCCTACGAA 
AAGGTCGTCG ATCGATTGCT GGCCAGTTCC GCTTACGGGG AACACTGGGC TCATCGCTGG 
CTCGATCTGG CGCGATACGC CGATTCCGCC GGCTATGCCG ATGATCCACC ACGAACCATC 
TGGGCCTATC GCGATTATGT GATCGAATCA TTGAATCGCA ATAAACCGTT CGATCAATTC 
ACCATTGAGC AACTGGCGGG CGATCTGCTT CCCAATGCCA CCCGGGAGCA GCGGATTGCG 
ACGGCATTTC ATCGTAATAC TCTGACCAAC AACGAAGGGG GCACCAACGA CGAAGAGTTC 
CGCACTGTGG CGGTGGTTGA CCGTGTGAAT ACCACCTTTG CCGTGTGGAT GGGGACGACG 
ATGGCGTGTG CTCAATGCCA CACTCACAAA TACGATCCAC TTTCGCAGAA GGAATACTTC 
GAGTTTTACG CACTGCTCAA CAATACAGCC GATGCCGATC GCCGGGATGA ATCTCCGCTG 
GAAAGCTGGT ACACGCCCGA GCAGGAATCG GAGCGCCAGC GCTTGAAGGA TCTGATTGCC 
CGGCACGAAC AGACTCTCTC GACACTGCCA GAAAATCTTG TGGCCGAGTT TCAGGCCTGG 
GACACCGCTT TTCCTCGAAC ACTCCAGTGG CATGCTCTGA TTCCCGAGAA GCTTTCACGG 
GAAAGTGGCT TGGAACTGGC GGTACAGGCT GATGGGCGAA TCGAAGCCCG TGAAGCGGCC 
CCGCAGGATG TCTATACATT GTCGATCCCA GCCAAAGCGG GCCAGTCGAT CGGCGGCTTG 
CGATTGGAAA CCATTCCCGA TCCCGCTTTG CCCGGTGGTG GTGCCGGGCA TGGAGGCGGG 
AACTTTGTGA TCTCCCGCAT TGAAGCTCAG TTTGAACCAG CCGACCGCAC GCAGGCTCCA 
CAGGCCCGTT TTGTGCGTAT TCGTTTGCCG GGCGCAGGAA AGATGATTCA CCTGGCCGAA 
GTCGAAGTTA AGGGCCGCAA CGCTTCTGTT CCCGATACCA GTAATCTGGC TCTCCACAAA 
CCCGCCCGGC AAAGTTCCAC CGATTTTGGA GGTGCTGCCG AAAGGGCCGT GGATGGAAAC 
ACCGGGGGAG ATTTCTATCA GAATTCCGTC ACTCACACGG CTGTTTCACA AGATCCGTGG 
TGGGAGGTTG ACCTGCAGCA AGTCTCCGAG ATCGATGAAA TCGTTCTCTG GAACCGCACC 
GACGGCTCTC TCGAACAGCG ACTCGCCGGG TACATCGTCG AGTTACTGGG TGAGAATCGA 
GAAGTCGTTT ATTCTCAAGC TCCCGCGACA GTCCCCTCGC CACAGATTTC GATTTCTCCG 
CGAGGGAAAA CCAGTCTACC GATTTCCATT GCGGTCGCCG ATTACTCACA AAAGGGGTTC 
TCTGCCGAAA GCCTGCTCTC TACGGGGCAA ATTGATCCCA AACAAGGCTG GGCAGTCGGC 
GGGCAACATA AGAAACGTCA TCAGTTAATG CTCTTGCCTC CAGAACCGTG GCAGGCACCG 
GGAGATGGCT CATGGGTCAT CACGATCCGT CAGCAATCCA GTCAGGCCAA ACATCTCCTG 
GGGTCATTCC AGATCATGGC CACCTCCGAT CCTCAGGTCA CCGCCTGGAT GAAATATCCC 
GCTGCGGCCC GCGAAACTCT CTCGAAAGCT GCCGATCAAC GCACCGATGA CGATCATCAA 
CTGCTCGTCA AAACGTTCCT CGAAGCGCAC CCTGCGTTGG AACCAGTTCG CAAACAAAAA 
GCCGACGACG AAAAAGCTCT GGCCAACATC CGCCAGATCA CAGTCCCGGT CTACAGCGAA 
CTTCCCCAGG GCCAAACGCG AGAAACCCGA GTCCAGCTCC GTGGCAATTA CCTGGATCTG 
GGTGAACCTG TTTCGCCAGG CATACCGGCA GTCTTTATGT CGCAAAGTCA TCAGCAGATC 
AATAACCGCC TGGAAATGGC CCGCTGGCTC GTGAGTGCAG ACAATCCTCT CACGGCCCGT 
GTGATTGCCA ATCGATACTG GGAAGATCTG TTTGGCGTGG GTCTAGTCTC AACCAGTGAA 
GAGTTCGGCT CACAAGGCGA GCTTCCCAGC CACCCCGAAC TTCTCGACTG GCTCGCCACA 
GAATTGCATC GTGTGAAGTG GGATCTGAAG GCGTTTATCA AGACCATCGT GATGAGCCAG 
ACGTATCGGC AATCATCCCG CACAACTCAG GAAGCCTATC TGGCAGATCC CGAGAATCGC 
TGGCTCGCCC GCGGGCCCAG ATTACGGCTC AGTGCCGAAA TGGTGCGGGA TCAGGCGTTG 
TTCGTCAGTG GCTTACTCTC GCGCAAGATG GGCGGGCCAC CTGTTCGTCC TCCACAGCCG 
AAGCTGGGTC TGAATGCCGC TTTCGGTGGC AATACCGATT GGGAGACCAG TCAGGGTGAA 
GACCAGTACC GCCGGGCGAT TTACACGCAA TGGCGGCGGT CAAATCCTTA TCCGTCGATG 
ATTACCTTCG ATGCTCCCAC GCGGGAAGTC TGCAATCTCC GGCGGGTGCG AACCAATACA 
CCGCTGCAGG CTCTGGTGAC ACTCAACGAT CCGGTGATCA TCGAAGCGTC ACAGCATCTG 
GCGCAACGCA TGCTGAAGGA AGCTCCCGCC GATCTTGAGG GACAGATTGC GTGGATCTGG 
TCGACAGTTC TCTGTCGACA GCCCACACCG GAGGAGTCGA ACAAAGTCAA ACAGCTCTAC 
GAATCGACAC TGCAGACATT CCAGCAGGAT CTCAAGCAGG CCCGCCAACT GGCCGGAGAT 
TCACAGATCG AAGAAAGCCA GGTCGCACAA CGAGCGGCCT GGACGACAAT TGCCAATGTG 
ATTCTCAATC TGGATGAAGC GTTAATGAAA CGGTGA 

 

Protein sequence

MARYSTSHWL GSFIGCGIAF LTFVPSAQAE SVSFVRDIKP ILSNACFHCH GPDEADRKGG 
TDGLRLDTFE GATADLGGGA QAIKAGHPEA SGMIERILST DADLVMPPPS VGRKLSPREV 
DLLKKWISEG AKYEPHWSYV KPVRPVIVAT QHQPDQSPAV MAGAIDELVQ RKLKELNLKP 
AAEADREALI RRVSLDLTGL PPTREELQAF LEDTSSNAYE KVVDRLLASS AYGEHWAHRW 
LDLARYADSA GYADDPPRTI WAYRDYVIES LNRNKPFDQF TIEQLAGDLL PNATREQRIA 
TAFHRNTLTN NEGGTNDEEF RTVAVVDRVN TTFAVWMGTT MACAQCHTHK YDPLSQKEYF 
EFYALLNNTA DADRRDESPL ESWYTPEQES ERQRLKDLIA RHEQTLSTLP ENLVAEFQAW 
DTAFPRTLQW HALIPEKLSR ESGLELAVQA DGRIEAREAA PQDVYTLSIP AKAGQSIGGL 
RLETIPDPAL PGGGAGHGGG NFVISRIEAQ FEPADRTQAP QARFVRIRLP GAGKMIHLAE 
VEVKGRNASV PDTSNLALHK PARQSSTDFG GAAERAVDGN TGGDFYQNSV THTAVSQDPW 
WEVDLQQVSE IDEIVLWNRT DGSLEQRLAG YIVELLGENR EVVYSQAPAT VPSPQISISP 
RGKTSLPISI AVADYSQKGF SAESLLSTGQ IDPKQGWAVG GQHKKRHQLM LLPPEPWQAP 
GDGSWVITIR QQSSQAKHLL GSFQIMATSD PQVTAWMKYP AAARETLSKA ADQRTDDDHQ 
LLVKTFLEAH PALEPVRKQK ADDEKALANI RQITVPVYSE LPQGQTRETR VQLRGNYLDL 
GEPVSPGIPA VFMSQSHQQI NNRLEMARWL VSADNPLTAR VIANRYWEDL FGVGLVSTSE 
EFGSQGELPS HPELLDWLAT ELHRVKWDLK AFIKTIVMSQ TYRQSSRTTQ EAYLADPENR 
WLARGPRLRL SAEMVRDQAL FVSGLLSRKM GGPPVRPPQP KLGLNAAFGG NTDWETSQGE 
DQYRRAIYTQ WRRSNPYPSM ITFDAPTREV CNLRRVRTNT PLQALVTLND PVIIEASQHL 
AQRMLKEAPA DLEGQIAWIW STVLCRQPTP EESNKVKQLY ESTLQTFQQD LKQARQLAGD 
SQIEESQVAQ RAAWTTIANV ILNLDEALMK R