Gene Plim_3194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3194 
Symbol 
ID9139908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp4130179 
End bp4130922 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content54% 
IMG OID 
Productribosomal protein S2 
Protein accessionYP_003631207 
Protein GI296123429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.758099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA TTGTCGTCAA GGATTTTCTT GAAGCCGGGA TTCATTACGG TCACCGTACC 
AGCCGCTGGA ATCCCAAAAT GCGGCCTTAC ATCTACGGCC GCCGCAATCT GATCCATATT 
ATCGACATCA AGGAAACGGT TCGCGGTCTG TTGCGAGCCA AGCGATACCT GCAGAAAGTG 
GCTTCTCAGG GCAGCCTGAT TCTGTTCTGC GGCACCAAAA AGCAGGCTTC GGATGCGATC 
CGTGAGTATG CCAATCAGGC CGGTATGCCA TTCGTCGATT ACCGCTGGCT GGGTGGTGTC 
TTTACGAACT TCCGCACGAT TCGTGGTCGT ATCAAGCGTC TGGAAGAGCT GGATCAGCTC 
TTTGAATCGG GCGAAATCGA GACTTATTCG AAGAAACGCC GTTCGACGTT GCTCCGCGAA 
CGCACCAAGA TGACACGCAA CCTCGATGGT CTGCGGAACA TGAACCGTCT GCCAGAGGCG 
ATGGTCATTG TCGATCCTCG GAAAGAGCAC AACGCGCTGC ACGAGGCCAA GCTCGTGGGC 
ATCAAGACGA TCGCTCTGCT TGATACGGAT TGCGATCCTG ATCAGGTCGA TCTGCCCATT 
CCCGGCAACG ACGACAGCAT CCGTTCGATT CAACTCGTCC TGCAGCACCT GACAGAATCC 
ATTCTGGAAG GCAAGAGCGT TCTGCCACAG GAAAAGGTTG AGCCTATGGT CGAAGAGCAA 
CTCAAGCCAC GTCCATCGCT GTAA
 
Protein sequence
MSDIVVKDFL EAGIHYGHRT SRWNPKMRPY IYGRRNLIHI IDIKETVRGL LRAKRYLQKV 
ASQGSLILFC GTKKQASDAI REYANQAGMP FVDYRWLGGV FTNFRTIRGR IKRLEELDQL 
FESGEIETYS KKRRSTLLRE RTKMTRNLDG LRNMNRLPEA MVIVDPRKEH NALHEAKLVG 
IKTIALLDTD CDPDQVDLPI PGNDDSIRSI QLVLQHLTES ILEGKSVLPQ EKVEPMVEEQ 
LKPRPSL