Gene Plim_3173 details

Gene Information

• Locus tag: Plim_3173
• ID: 9139887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4106043
• End bp: 4106798
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 59%
• Product: beta-lactamase domain protein
• Protein accession: YP_003631187
• Protein GI: 296123409

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.558996
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGTA TCCATCACAT CAACTGCGGC ACTCTTCTCG TCCCGGGGTA TCCCACGGTC 
GTCTGCCATT GCCTGTTGCT GGAAGACGCG AAAGGGCTGG CACTTGTCGA TAGTGGTATC 
GGCCTCCTCG ATGTTCAGAA CCCGCTGGAA CGTGTGGGGC AGCCGCTCAT TGATCTGGCA 
GGCTTTCAGT TCCATGAGCA CGATACCGCC ATCCGCCGGA TCGAAGCGCT CGGGCTTAAG 
CCGCAGGATG TCCGACATAT TGTGCTCACT CATGCTGATC CCGATCATGC GGGGGGCCTG 
GCCGATTTCC CTGAAGCGAA AGTCCATCTG GCAGCTGAAG AGCGGGCCGC CTTGGAAACC 
GGCCACTGGC GATATCTCCG CATTCAATTT GCCCATGGCC CTCAGTGGGA GACCTACAGC 
TCATCCCCGC AAATGTGGTT CGGCCTCGAA GCCCGCGAAG TCGCTCTGGG CTTTGAAGCG 
CAGGTCCTGC TGATTCCACT CTTTGGCCAT ACCCGTGGCC ATTGCGGCGT TGCTATTTCC 
CAGGGAAACC GCTGGATGCT CCATGTCGGC GATGCCTACT ACCTTAAGGC CGAACTCACC 
GTCGAGAATC ACCCCGTGGA TGCCATGGCC ACTCAACGCG CCGATGACGA TCGTCTACGC 
CGGGCAAGTC TTGAACAGCT CCGCCGCCTG GCCCGCGATC ATGCCGACGA AATCGATATG 
GTCGGCTATC ACGATCTGAC AGAGCTCCCC GATTAA 

 

Protein sequence

MTRIHHINCG TLLVPGYPTV VCHCLLLEDA KGLALVDSGI GLLDVQNPLE RVGQPLIDLA 
GFQFHEHDTA IRRIEALGLK PQDVRHIVLT HADPDHAGGL ADFPEAKVHL AAEERAALET 
GHWRYLRIQF AHGPQWETYS SSPQMWFGLE AREVALGFEA QVLLIPLFGH TRGHCGVAIS 
QGNRWMLHVG DAYYLKAELT VENHPVDAMA TQRADDDRLR RASLEQLRRL ARDHADEIDM 
VGYHDLTELP D