Gene Plim_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3171 
Symbol 
ID9139885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4104254 
End bp4105333 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content58% 
IMG OID 
ProductEsterase/lipase-like protein 
Protein accessionYP_003631185 
Protein GI296123407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTT CACCAGCAGC ACTTCAGCGT CGCGCGACGT TGGCCGCCCT GCTCTCCCTT 
GCTCTGGCAG CCGGGCCTCT GGCTCTCGCC CAGGAGCCAA CAGCCGCTGG AAAACCTGAG
CAACCAGCCA CAGCGAAACC AGCAGCGAAG ACTGCTCAGG CCAAGCGTGC GGCACAGGCG
GCGAACAATC CCATTGTCCC CTATAAAATC GCGCCGACCG CCAAAGACCT GCCTTACGGC
ACTCATCCTC GACAAGTCCT CGATTTCTGG CAGGCCAAGT CGACCACTCC CACTCCTGTC
GTATTCTTCA TTCATGGCGG TGGCTGGAAC AATGGCGATA AATCGTCGGC AGTCCGCACT
CTCGACCTTC CCAAACTGCT CGACAGCGGG ATCTCCGTGG TGACGATCAA TTACAGGCTG
GTTCCTCAGG CGTATGAAGC CGGCATCGAA CCACCTGTAA AATGGCCACT TTCGGATGCC
GCACGAGCCC TTCAATTTGT GCGGTCCAAA GCCAGCGAGT GGAATCTCGA TAAGGCGAGG
ATTGGAGCCT GTGGTGGTTC TGCCGGTGCC TGCTCGTCGC TCTGGCTGGC GATGCATGAC
GATATGGTGG TCCCTGATAG CAATGATCCC ATCGAACGCG AATCGACCCG CCTGTGGTGT
GCTGTTGTGA GCGGGGCACA GACTTCGCTC GATCCTGCGG AAACCAGTGC CTGGATTCCC
AACATGGAAT ATGGCGGCCA TGCGTATGGG TTCCGTGAAG CGGGTCAGGC CCGGCCAGCC
GAGTTCAAGA AGTTCCTCGC AGGTCGCGAA AAGGTGCTAC CCTGGCTGAA GGAGTATTCA
CCCGCCTCCC ATTCCTCGAA AGACGATCCC ACGATCGTCC TGTTCTATGG CCAGAAAGAG
CCCGCCCAGA AGGGAGATAC GCAAAAGGAT CCGACTCACT CGATTCTGTT GGGTAAACTC
CTTAAGGAAA AACTCGATCC ACTGGGTGTG AAGTGCGTCG TCACATCCCC CGGCGAACCC
GACCCTTCCT TCACCTCGAT CACCGATTCG CTGATCACCG AACTCAAAGC CGCTAAATGA
 
Protein sequence
MNFSPAALQR RATLAALLSL ALAAGPLALA QEPTAAGKPE QPATAKPAAK TAQAKRAAQA 
ANNPIVPYKI APTAKDLPYG THPRQVLDFW QAKSTTPTPV VFFIHGGGWN NGDKSSAVRT
LDLPKLLDSG ISVVTINYRL VPQAYEAGIE PPVKWPLSDA ARALQFVRSK ASEWNLDKAR
IGACGGSAGA CSSLWLAMHD DMVVPDSNDP IERESTRLWC AVVSGAQTSL DPAETSAWIP
NMEYGGHAYG FREAGQARPA EFKKFLAGRE KVLPWLKEYS PASHSSKDDP TIVLFYGQKE
PAQKGDTQKD PTHSILLGKL LKEKLDPLGV KCVVTSPGEP DPSFTSITDS LITELKAAK